Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trnp1Q80ZI1 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trnp1Q80ZI1 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trnp1Q80ZI1 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trnp1Q80ZI1 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trnp1Q80ZI1 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trnp1Q80ZI1 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.03■□□□□ 0.48
Trnp1Q80ZI1 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trnp1Q80ZI1 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Trnp1Q80ZI1 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Trnp1Q80ZI1 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trnp1Q80ZI1 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.02■□□□□ 0.48
Trnp1Q80ZI1 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Trnp1Q80ZI1 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Trnp1Q80ZI1 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Trnp1Q80ZI1 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trnp1Q80ZI1 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trnp1Q80ZI1 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trnp1Q80ZI1 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trnp1Q80ZI1 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trnp1Q80ZI1 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trnp1Q80ZI1 Rprl2-201ENSMUST00000157150 290 ntBASIC18.02■□□□□ 0.48
Trnp1Q80ZI1 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Trnp1Q80ZI1 Gm18889-201ENSMUST00000174284 929 ntBASIC18.02■□□□□ 0.48
Trnp1Q80ZI1 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trnp1Q80ZI1 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC18.02■□□□□ 0.48
Trnp1Q80ZI1 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC18.02■□□□□ 0.48
Trnp1Q80ZI1 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC18.02■□□□□ 0.48
Trnp1Q80ZI1 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trnp1Q80ZI1 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Trnp1Q80ZI1 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.47
Trnp1Q80ZI1 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trnp1Q80ZI1 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trnp1Q80ZI1 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trnp1Q80ZI1 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Trnp1Q80ZI1 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC18.01■□□□□ 0.47
Trnp1Q80ZI1 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trnp1Q80ZI1 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trnp1Q80ZI1 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trnp1Q80ZI1 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Trnp1Q80ZI1 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
Trnp1Q80ZI1 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Trnp1Q80ZI1 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Trnp1Q80ZI1 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC18.01■□□□□ 0.47
Trnp1Q80ZI1 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Trnp1Q80ZI1 Gm20553-201ENSMUST00000204205 844 ntBASIC18.01■□□□□ 0.47
Trnp1Q80ZI1 Thap2-203ENSMUST00000218989 527 ntBASIC18.01■□□□□ 0.47
Trnp1Q80ZI1 AC122024.2-201ENSMUST00000220086 871 ntBASIC18.01■□□□□ 0.47
Trnp1Q80ZI1 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.01■□□□□ 0.47
Trnp1Q80ZI1 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trnp1Q80ZI1 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trnp1Q80ZI1 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trnp1Q80ZI1 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trnp1Q80ZI1 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trnp1Q80ZI1 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trnp1Q80ZI1 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
Trnp1Q80ZI1 AC119177.1-201ENSMUST00000227647 1332 ntBASIC18■□□□□ 0.47
Trnp1Q80ZI1 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trnp1Q80ZI1 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trnp1Q80ZI1 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trnp1Q80ZI1 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC18■□□□□ 0.47
Trnp1Q80ZI1 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC18■□□□□ 0.47
Trnp1Q80ZI1 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trnp1Q80ZI1 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC18■□□□□ 0.47
Trnp1Q80ZI1 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC18■□□□□ 0.47
Trnp1Q80ZI1 AC124732.2-201ENSMUST00000221977 316 ntBASIC18■□□□□ 0.47
Trnp1Q80ZI1 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Trnp1Q80ZI1 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trnp1Q80ZI1 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Trnp1Q80ZI1 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trnp1Q80ZI1 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.99■□□□□ 0.47
Trnp1Q80ZI1 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trnp1Q80ZI1 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trnp1Q80ZI1 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Trnp1Q80ZI1 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Trnp1Q80ZI1 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Trnp1Q80ZI1 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
Trnp1Q80ZI1 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Trnp1Q80ZI1 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trnp1Q80ZI1 Gm43125-201ENSMUST00000201724 730 ntBASIC17.99■□□□□ 0.47
Trnp1Q80ZI1 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Trnp1Q80ZI1 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trnp1Q80ZI1 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trnp1Q80ZI1 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trnp1Q80ZI1 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trnp1Q80ZI1 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trnp1Q80ZI1 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trnp1Q80ZI1 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Trnp1Q80ZI1 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trnp1Q80ZI1 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trnp1Q80ZI1 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trnp1Q80ZI1 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trnp1Q80ZI1 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.98■□□□□ 0.47
Trnp1Q80ZI1 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trnp1Q80ZI1 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.98■□□□□ 0.47
Trnp1Q80ZI1 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trnp1Q80ZI1 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trnp1Q80ZI1 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trnp1Q80ZI1 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trnp1Q80ZI1 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms