Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.6■□□□□ 0.09
Lrrtm4Q80XG9 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lrrtm4Q80XG9 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lrrtm4Q80XG9 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lrrtm4Q80XG9 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
Lrrtm4Q80XG9 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lrrtm4Q80XG9 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Lrrtm4Q80XG9 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Lrrtm4Q80XG9 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lrrtm4Q80XG9 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Lrrtm4Q80XG9 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lrrtm4Q80XG9 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.6■□□□□ 0.09
Lrrtm4Q80XG9 Gm28659-201ENSMUST00000188013 759 ntBASIC15.6■□□□□ 0.09
Lrrtm4Q80XG9 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.6■□□□□ 0.09
Lrrtm4Q80XG9 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.6■□□□□ 0.09
Lrrtm4Q80XG9 Gm7506-201ENSMUST00000207758 815 ntBASIC15.6■□□□□ 0.09
Lrrtm4Q80XG9 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.6■□□□□ 0.09
Lrrtm4Q80XG9 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Lrrtm4Q80XG9 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lrrtm4Q80XG9 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lrrtm4Q80XG9 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lrrtm4Q80XG9 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lrrtm4Q80XG9 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lrrtm4Q80XG9 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Lrrtm4Q80XG9 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lrrtm4Q80XG9 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Lrrtm4Q80XG9 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lrrtm4Q80XG9 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
Lrrtm4Q80XG9 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.59■□□□□ 0.09
Lrrtm4Q80XG9 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lrrtm4Q80XG9 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lrrtm4Q80XG9 Mir8098-201ENSMUST00000184011 137 ntBASIC15.59■□□□□ 0.09
Lrrtm4Q80XG9 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.59■□□□□ 0.09
Lrrtm4Q80XG9 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
Lrrtm4Q80XG9 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.59■□□□□ 0.09
Lrrtm4Q80XG9 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lrrtm4Q80XG9 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
Lrrtm4Q80XG9 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.59■□□□□ 0.09
Lrrtm4Q80XG9 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lrrtm4Q80XG9 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lrrtm4Q80XG9 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.59■□□□□ 0.09
Lrrtm4Q80XG9 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lrrtm4Q80XG9 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Lrrtm4Q80XG9 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Lrrtm4Q80XG9 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Lrrtm4Q80XG9 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Lrrtm4Q80XG9 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.09
Lrrtm4Q80XG9 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lrrtm4Q80XG9 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lrrtm4Q80XG9 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Lrrtm4Q80XG9 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.58■□□□□ 0.08
Lrrtm4Q80XG9 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.58■□□□□ 0.08
Lrrtm4Q80XG9 Gm12497-201ENSMUST00000138778 237 ntBASIC15.58■□□□□ 0.08
Lrrtm4Q80XG9 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lrrtm4Q80XG9 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lrrtm4Q80XG9 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lrrtm4Q80XG9 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.58■□□□□ 0.08
Lrrtm4Q80XG9 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Lrrtm4Q80XG9 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.58■□□□□ 0.08
Lrrtm4Q80XG9 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Lrrtm4Q80XG9 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lrrtm4Q80XG9 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lrrtm4Q80XG9 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lrrtm4Q80XG9 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lrrtm4Q80XG9 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Lrrtm4Q80XG9 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lrrtm4Q80XG9 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Lrrtm4Q80XG9 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lrrtm4Q80XG9 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lrrtm4Q80XG9 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Lrrtm4Q80XG9 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lrrtm4Q80XG9 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lrrtm4Q80XG9 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Lrrtm4Q80XG9 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lrrtm4Q80XG9 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lrrtm4Q80XG9 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lrrtm4Q80XG9 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lrrtm4Q80XG9 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lrrtm4Q80XG9 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lrrtm4Q80XG9 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lrrtm4Q80XG9 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lrrtm4Q80XG9 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lrrtm4Q80XG9 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Lrrtm4Q80XG9 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lrrtm4Q80XG9 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lrrtm4Q80XG9 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Lrrtm4Q80XG9 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.57■□□□□ 0.08
Lrrtm4Q80XG9 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lrrtm4Q80XG9 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lrrtm4Q80XG9 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lrrtm4Q80XG9 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lrrtm4Q80XG9 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lrrtm4Q80XG9 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lrrtm4Q80XG9 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lrrtm4Q80XG9 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lrrtm4Q80XG9 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lrrtm4Q80XG9 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lrrtm4Q80XG9 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
Lrrtm4Q80XG9 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Lrrtm4Q80XG9 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms