Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Usp6nlQ80XC3 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp6nlQ80XC3 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp6nlQ80XC3 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp6nlQ80XC3 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp6nlQ80XC3 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp6nlQ80XC3 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp6nlQ80XC3 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp6nlQ80XC3 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp6nlQ80XC3 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp6nlQ80XC3 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp6nlQ80XC3 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Usp6nlQ80XC3 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp6nlQ80XC3 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp6nlQ80XC3 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp6nlQ80XC3 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp6nlQ80XC3 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp6nlQ80XC3 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC17.67■□□□□ 0.42
Usp6nlQ80XC3 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Usp6nlQ80XC3 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Usp6nlQ80XC3 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.67■□□□□ 0.42
Usp6nlQ80XC3 AC151286.1-201ENSMUST00000198489 145 ntBASIC17.67■□□□□ 0.42
Usp6nlQ80XC3 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Usp6nlQ80XC3 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp6nlQ80XC3 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Usp6nlQ80XC3 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Usp6nlQ80XC3 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp6nlQ80XC3 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Usp6nlQ80XC3 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.67■□□□□ 0.42
Usp6nlQ80XC3 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp6nlQ80XC3 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.67■□□□□ 0.42
Usp6nlQ80XC3 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Usp6nlQ80XC3 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp6nlQ80XC3 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp6nlQ80XC3 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp6nlQ80XC3 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Usp6nlQ80XC3 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Usp6nlQ80XC3 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Usp6nlQ80XC3 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Usp6nlQ80XC3 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp6nlQ80XC3 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp6nlQ80XC3 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.66■□□□□ 0.42
Usp6nlQ80XC3 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp6nlQ80XC3 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Usp6nlQ80XC3 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp6nlQ80XC3 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Usp6nlQ80XC3 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp6nlQ80XC3 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.66■□□□□ 0.42
Usp6nlQ80XC3 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp6nlQ80XC3 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Usp6nlQ80XC3 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp6nlQ80XC3 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Usp6nlQ80XC3 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp6nlQ80XC3 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp6nlQ80XC3 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.65■□□□□ 0.42
Usp6nlQ80XC3 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Usp6nlQ80XC3 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp6nlQ80XC3 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp6nlQ80XC3 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp6nlQ80XC3 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp6nlQ80XC3 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp6nlQ80XC3 H2af-ps-201ENSMUST00000119066 295 ntBASIC17.65■□□□□ 0.42
Usp6nlQ80XC3 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp6nlQ80XC3 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Usp6nlQ80XC3 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.65■□□□□ 0.42
Usp6nlQ80XC3 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp6nlQ80XC3 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp6nlQ80XC3 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC17.65■□□□□ 0.42
Usp6nlQ80XC3 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Usp6nlQ80XC3 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.65■□□□□ 0.42
Usp6nlQ80XC3 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp6nlQ80XC3 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp6nlQ80XC3 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp6nlQ80XC3 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp6nlQ80XC3 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp6nlQ80XC3 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp6nlQ80XC3 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp6nlQ80XC3 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp6nlQ80XC3 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Usp6nlQ80XC3 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.64■□□□□ 0.42
Usp6nlQ80XC3 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Usp6nlQ80XC3 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Usp6nlQ80XC3 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Usp6nlQ80XC3 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC17.64■□□□□ 0.41
Usp6nlQ80XC3 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp6nlQ80XC3 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp6nlQ80XC3 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp6nlQ80XC3 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Usp6nlQ80XC3 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC17.64■□□□□ 0.41
Usp6nlQ80XC3 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Usp6nlQ80XC3 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC17.64■□□□□ 0.41
Usp6nlQ80XC3 Gm44945-201ENSMUST00000206764 1187 ntBASIC17.64■□□□□ 0.41
Usp6nlQ80XC3 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.64■□□□□ 0.41
Usp6nlQ80XC3 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp6nlQ80XC3 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp6nlQ80XC3 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Usp6nlQ80XC3 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp6nlQ80XC3 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp6nlQ80XC3 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Usp6nlQ80XC3 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms