Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc116Q80X53 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc116Q80X53 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc116Q80X53 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Ccdc116Q80X53 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc116Q80X53 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Ccdc116Q80X53 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc116Q80X53 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc116Q80X53 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc116Q80X53 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc116Q80X53 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
Ccdc116Q80X53 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc116Q80X53 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.73■□□□□ 0.11
Ccdc116Q80X53 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc116Q80X53 Gm10052-201ENSMUST00000168019 960 ntBASIC15.73■□□□□ 0.11
Ccdc116Q80X53 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc116Q80X53 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc116Q80X53 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Ccdc116Q80X53 Gm7729-201ENSMUST00000050143 801 ntBASIC15.73■□□□□ 0.11
Ccdc116Q80X53 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc116Q80X53 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc116Q80X53 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.73■□□□□ 0.11
Ccdc116Q80X53 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc116Q80X53 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc116Q80X53 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc116Q80X53 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc116Q80X53 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc116Q80X53 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.73■□□□□ 0.11
Ccdc116Q80X53 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc116Q80X53 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc116Q80X53 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc116Q80X53 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.72■□□□□ 0.11
Ccdc116Q80X53 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc116Q80X53 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc116Q80X53 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc116Q80X53 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc116Q80X53 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc116Q80X53 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.72■□□□□ 0.11
Ccdc116Q80X53 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.72■□□□□ 0.11
Ccdc116Q80X53 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.72■□□□□ 0.11
Ccdc116Q80X53 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.72■□□□□ 0.11
Ccdc116Q80X53 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc116Q80X53 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.72■□□□□ 0.11
Ccdc116Q80X53 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Ccdc116Q80X53 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc116Q80X53 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc116Q80X53 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc116Q80X53 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Ccdc116Q80X53 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.72■□□□□ 0.11
Ccdc116Q80X53 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc116Q80X53 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc116Q80X53 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc116Q80X53 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc116Q80X53 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc116Q80X53 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.71■□□□□ 0.11
Ccdc116Q80X53 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc116Q80X53 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
Ccdc116Q80X53 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc116Q80X53 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc116Q80X53 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc116Q80X53 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Ccdc116Q80X53 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc116Q80X53 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc116Q80X53 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc116Q80X53 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc116Q80X53 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc116Q80X53 Gm9013-201ENSMUST00000132939 882 ntBASIC15.71■□□□□ 0.11
Ccdc116Q80X53 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc116Q80X53 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
Ccdc116Q80X53 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc116Q80X53 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc116Q80X53 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
Ccdc116Q80X53 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc116Q80X53 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Ccdc116Q80X53 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc116Q80X53 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc116Q80X53 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Ccdc116Q80X53 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc116Q80X53 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc116Q80X53 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc116Q80X53 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.7■□□□□ 0.1
Ccdc116Q80X53 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Ccdc116Q80X53 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc116Q80X53 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc116Q80X53 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Ccdc116Q80X53 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc116Q80X53 Gm5587-201ENSMUST00000206270 674 ntBASIC15.7■□□□□ 0.1
Ccdc116Q80X53 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Ccdc116Q80X53 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc116Q80X53 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc116Q80X53 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc116Q80X53 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc116Q80X53 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc116Q80X53 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc116Q80X53 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.7■□□□□ 0.1
Ccdc116Q80X53 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc116Q80X53 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc116Q80X53 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc116Q80X53 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC15.69■□□□□ 0.1
Ccdc116Q80X53 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms