Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim62Q80V85 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Trim62Q80V85 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim62Q80V85 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Trim62Q80V85 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim62Q80V85 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim62Q80V85 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim62Q80V85 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trim62Q80V85 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim62Q80V85 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.57■□□□□ 0.24
Trim62Q80V85 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim62Q80V85 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim62Q80V85 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim62Q80V85 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim62Q80V85 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.57■□□□□ 0.24
Trim62Q80V85 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim62Q80V85 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim62Q80V85 Gm25745-201ENSMUST00000174945 133 ntBASIC16.57■□□□□ 0.24
Trim62Q80V85 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.57■□□□□ 0.24
Trim62Q80V85 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim62Q80V85 Birc2-201ENSMUST00000054878 378 ntBASIC16.57■□□□□ 0.24
Trim62Q80V85 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim62Q80V85 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim62Q80V85 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trim62Q80V85 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trim62Q80V85 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim62Q80V85 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim62Q80V85 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trim62Q80V85 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim62Q80V85 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.56■□□□□ 0.24
Trim62Q80V85 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim62Q80V85 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim62Q80V85 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim62Q80V85 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim62Q80V85 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim62Q80V85 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim62Q80V85 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim62Q80V85 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim62Q80V85 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.56■□□□□ 0.24
Trim62Q80V85 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trim62Q80V85 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim62Q80V85 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.56■□□□□ 0.24
Trim62Q80V85 Gm6257-201ENSMUST00000163864 910 ntBASIC16.56■□□□□ 0.24
Trim62Q80V85 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.56■□□□□ 0.24
Trim62Q80V85 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.56■□□□□ 0.24
Trim62Q80V85 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.56■□□□□ 0.24
Trim62Q80V85 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.56■□□□□ 0.24
Trim62Q80V85 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim62Q80V85 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim62Q80V85 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.56■□□□□ 0.24
Trim62Q80V85 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trim62Q80V85 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim62Q80V85 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim62Q80V85 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim62Q80V85 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.55■□□□□ 0.24
Trim62Q80V85 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trim62Q80V85 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim62Q80V85 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim62Q80V85 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Trim62Q80V85 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim62Q80V85 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim62Q80V85 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
Trim62Q80V85 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim62Q80V85 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim62Q80V85 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim62Q80V85 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim62Q80V85 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Trim62Q80V85 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim62Q80V85 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.55■□□□□ 0.24
Trim62Q80V85 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.55■□□□□ 0.24
Trim62Q80V85 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim62Q80V85 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim62Q80V85 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim62Q80V85 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim62Q80V85 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim62Q80V85 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim62Q80V85 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
Trim62Q80V85 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.55■□□□□ 0.24
Trim62Q80V85 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim62Q80V85 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Trim62Q80V85 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.54■□□□□ 0.24
Trim62Q80V85 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim62Q80V85 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
Trim62Q80V85 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim62Q80V85 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trim62Q80V85 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Trim62Q80V85 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Trim62Q80V85 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.54■□□□□ 0.24
Trim62Q80V85 Gm43347-201ENSMUST00000200226 580 ntBASIC16.54■□□□□ 0.24
Trim62Q80V85 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.54■□□□□ 0.24
Trim62Q80V85 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.54■□□□□ 0.24
Trim62Q80V85 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Trim62Q80V85 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim62Q80V85 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim62Q80V85 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.54■□□□□ 0.24
Trim62Q80V85 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
Trim62Q80V85 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim62Q80V85 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim62Q80V85 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trim62Q80V85 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms