Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp8Q80U87 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp8Q80U87 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp8Q80U87 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp8Q80U87 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Usp8Q80U87 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Usp8Q80U87 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp8Q80U87 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Usp8Q80U87 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.12■□□□□ 0.17
Usp8Q80U87 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Usp8Q80U87 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Usp8Q80U87 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Usp8Q80U87 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Usp8Q80U87 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Usp8Q80U87 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Usp8Q80U87 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Usp8Q80U87 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.12■□□□□ 0.17
Usp8Q80U87 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.12■□□□□ 0.17
Usp8Q80U87 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.12■□□□□ 0.17
Usp8Q80U87 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Usp8Q80U87 Gm44450-201ENSMUST00000199528 114 ntBASIC16.12■□□□□ 0.17
Usp8Q80U87 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.12■□□□□ 0.17
Usp8Q80U87 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Usp8Q80U87 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Usp8Q80U87 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.12■□□□□ 0.17
Usp8Q80U87 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Usp8Q80U87 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Usp8Q80U87 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Usp8Q80U87 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Usp8Q80U87 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Usp8Q80U87 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Usp8Q80U87 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Usp8Q80U87 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Usp8Q80U87 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Usp8Q80U87 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Usp8Q80U87 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Usp8Q80U87 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Usp8Q80U87 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Usp8Q80U87 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Usp8Q80U87 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Usp8Q80U87 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Usp8Q80U87 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Usp8Q80U87 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Usp8Q80U87 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Usp8Q80U87 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Usp8Q80U87 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Usp8Q80U87 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.11■□□□□ 0.17
Usp8Q80U87 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Usp8Q80U87 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Usp8Q80U87 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Usp8Q80U87 Gm10566-201ENSMUST00000086739 996 ntBASIC16.11■□□□□ 0.17
Usp8Q80U87 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.11■□□□□ 0.17
Usp8Q80U87 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Usp8Q80U87 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Usp8Q80U87 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.11■□□□□ 0.17
Usp8Q80U87 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Usp8Q80U87 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Usp8Q80U87 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Usp8Q80U87 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Usp8Q80U87 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Usp8Q80U87 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Usp8Q80U87 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Usp8Q80U87 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Usp8Q80U87 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp8Q80U87 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Usp8Q80U87 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Usp8Q80U87 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
Usp8Q80U87 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Usp8Q80U87 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp8Q80U87 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp8Q80U87 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp8Q80U87 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp8Q80U87 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Usp8Q80U87 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.1■□□□□ 0.17
Usp8Q80U87 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.1■□□□□ 0.17
Usp8Q80U87 Mir1668-201ENSMUST00000184114 107 ntBASIC16.1■□□□□ 0.17
Usp8Q80U87 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Usp8Q80U87 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.1■□□□□ 0.17
Usp8Q80U87 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp8Q80U87 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp8Q80U87 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp8Q80U87 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp8Q80U87 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp8Q80U87 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp8Q80U87 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp8Q80U87 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Usp8Q80U87 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Usp8Q80U87 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.09■□□□□ 0.17
Usp8Q80U87 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Usp8Q80U87 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Usp8Q80U87 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Usp8Q80U87 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Usp8Q80U87 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.09■□□□□ 0.17
Usp8Q80U87 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Usp8Q80U87 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.09■□□□□ 0.17
Usp8Q80U87 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Usp8Q80U87 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Usp8Q80U87 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.09■□□□□ 0.17
Usp8Q80U87 Mir5130-201ENSMUST00000175160 84 ntBASIC16.09■□□□□ 0.17
Usp8Q80U87 Gm7889-201ENSMUST00000185591 958 ntBASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms