Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Rpap1Q80TE0 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC24.73■■□□□ 1.55
Rpap1Q80TE0 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Rpap1Q80TE0 Gm6226-201ENSMUST00000117765 1146 ntBASIC24.73■■□□□ 1.55
Rpap1Q80TE0 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC24.73■■□□□ 1.55
Rpap1Q80TE0 AC122024.2-201ENSMUST00000220086 871 ntBASIC24.73■■□□□ 1.55
Rpap1Q80TE0 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Rpap1Q80TE0 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Rpap1Q80TE0 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC24.73■■□□□ 1.55
Rpap1Q80TE0 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
Rpap1Q80TE0 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Rpap1Q80TE0 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Rpap1Q80TE0 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Rpap1Q80TE0 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Rpap1Q80TE0 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
Rpap1Q80TE0 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Rpap1Q80TE0 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Rpap1Q80TE0 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Rpap1Q80TE0 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Rpap1Q80TE0 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
Rpap1Q80TE0 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Rpap1Q80TE0 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Rpap1Q80TE0 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
Rpap1Q80TE0 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Rpap1Q80TE0 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC24.71■■□□□ 1.55
Rpap1Q80TE0 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Rpap1Q80TE0 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC24.71■■□□□ 1.55
Rpap1Q80TE0 Mir6990-201ENSMUST00000183724 91 ntBASIC24.71■■□□□ 1.55
Rpap1Q80TE0 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC24.71■■□□□ 1.55
Rpap1Q80TE0 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
Rpap1Q80TE0 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Rpap1Q80TE0 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Rpap1Q80TE0 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
Rpap1Q80TE0 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC24.71■■□□□ 1.55
Rpap1Q80TE0 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC24.71■■□□□ 1.55
Rpap1Q80TE0 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Rpap1Q80TE0 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
Rpap1Q80TE0 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Rpap1Q80TE0 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
Rpap1Q80TE0 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Rpap1Q80TE0 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
Rpap1Q80TE0 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC24.7■■□□□ 1.55
Rpap1Q80TE0 Gm43474-201ENSMUST00000196415 774 ntBASIC24.7■■□□□ 1.55
Rpap1Q80TE0 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC24.7■■□□□ 1.55
Rpap1Q80TE0 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Rpap1Q80TE0 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Rpap1Q80TE0 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.54
Rpap1Q80TE0 Gm13216-201ENSMUST00000117145 591 ntBASIC24.69■■□□□ 1.54
Rpap1Q80TE0 Gm27301-201ENSMUST00000184012 127 ntBASIC24.69■■□□□ 1.54
Rpap1Q80TE0 Gm20553-201ENSMUST00000204205 844 ntBASIC24.69■■□□□ 1.54
Rpap1Q80TE0 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Rpap1Q80TE0 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC24.69■■□□□ 1.54
Rpap1Q80TE0 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Rpap1Q80TE0 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Rpap1Q80TE0 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Rpap1Q80TE0 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Rpap1Q80TE0 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Rpap1Q80TE0 AC121598.2-201ENSMUST00000228376 2325 ntBASIC24.69■■□□□ 1.54
Rpap1Q80TE0 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Rpap1Q80TE0 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Rpap1Q80TE0 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
Rpap1Q80TE0 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
Rpap1Q80TE0 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Rpap1Q80TE0 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
Rpap1Q80TE0 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
Rpap1Q80TE0 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC24.69■■□□□ 1.54
Rpap1Q80TE0 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Rpap1Q80TE0 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Rpap1Q80TE0 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC24.69■■□□□ 1.54
Rpap1Q80TE0 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Rpap1Q80TE0 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Rpap1Q80TE0 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Rpap1Q80TE0 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Rpap1Q80TE0 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Rpap1Q80TE0 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
Rpap1Q80TE0 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Rpap1Q80TE0 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Rpap1Q80TE0 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Rpap1Q80TE0 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC24.68■■□□□ 1.54
Rpap1Q80TE0 Mir7023-201ENSMUST00000185093 64 ntBASIC24.68■■□□□ 1.54
Rpap1Q80TE0 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC24.68■■□□□ 1.54
Rpap1Q80TE0 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
Rpap1Q80TE0 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
Rpap1Q80TE0 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC24.67■■□□□ 1.54
Rpap1Q80TE0 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
Rpap1Q80TE0 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Rpap1Q80TE0 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Rpap1Q80TE0 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Rpap1Q80TE0 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Rpap1Q80TE0 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Rpap1Q80TE0 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Rpap1Q80TE0 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Rpap1Q80TE0 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC24.67■■□□□ 1.54
Rpap1Q80TE0 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Rpap1Q80TE0 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Rpap1Q80TE0 Gm43125-201ENSMUST00000201724 730 ntBASIC24.67■■□□□ 1.54
Rpap1Q80TE0 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
Rpap1Q80TE0 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Rpap1Q80TE0 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
Rpap1Q80TE0 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms