Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ctdp1Q7TSG2 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.55■□□□□ 0.4
Ctdp1Q7TSG2 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ctdp1Q7TSG2 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Ctdp1Q7TSG2 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ctdp1Q7TSG2 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ctdp1Q7TSG2 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Ctdp1Q7TSG2 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ctdp1Q7TSG2 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Ctdp1Q7TSG2 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ctdp1Q7TSG2 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ctdp1Q7TSG2 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ctdp1Q7TSG2 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.54■□□□□ 0.4
Ctdp1Q7TSG2 Gm11539-201ENSMUST00000119837 557 ntBASIC17.54■□□□□ 0.4
Ctdp1Q7TSG2 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Ctdp1Q7TSG2 Gm13436-201ENSMUST00000120418 567 ntBASIC17.54■□□□□ 0.4
Ctdp1Q7TSG2 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Ctdp1Q7TSG2 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ctdp1Q7TSG2 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ctdp1Q7TSG2 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.54■□□□□ 0.4
Ctdp1Q7TSG2 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ctdp1Q7TSG2 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ctdp1Q7TSG2 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ctdp1Q7TSG2 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ctdp1Q7TSG2 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ctdp1Q7TSG2 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.54■□□□□ 0.4
Ctdp1Q7TSG2 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.54■□□□□ 0.4
Ctdp1Q7TSG2 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ctdp1Q7TSG2 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ctdp1Q7TSG2 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ctdp1Q7TSG2 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ctdp1Q7TSG2 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Ctdp1Q7TSG2 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ctdp1Q7TSG2 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ctdp1Q7TSG2 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ctdp1Q7TSG2 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ctdp1Q7TSG2 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ctdp1Q7TSG2 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ctdp1Q7TSG2 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ctdp1Q7TSG2 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ctdp1Q7TSG2 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ctdp1Q7TSG2 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ctdp1Q7TSG2 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ctdp1Q7TSG2 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Ctdp1Q7TSG2 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.53■□□□□ 0.4
Ctdp1Q7TSG2 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.53■□□□□ 0.4
Ctdp1Q7TSG2 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ctdp1Q7TSG2 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ctdp1Q7TSG2 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Ctdp1Q7TSG2 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ctdp1Q7TSG2 Sybu-209ENSMUST00000228639 4113 ntBASIC17.53■□□□□ 0.4
Ctdp1Q7TSG2 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ctdp1Q7TSG2 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ctdp1Q7TSG2 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ctdp1Q7TSG2 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ctdp1Q7TSG2 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.52■□□□□ 0.4
Ctdp1Q7TSG2 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ctdp1Q7TSG2 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ctdp1Q7TSG2 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Ctdp1Q7TSG2 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Ctdp1Q7TSG2 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Ctdp1Q7TSG2 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.52■□□□□ 0.4
Ctdp1Q7TSG2 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.52■□□□□ 0.4
Ctdp1Q7TSG2 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ctdp1Q7TSG2 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ctdp1Q7TSG2 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Ctdp1Q7TSG2 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Ctdp1Q7TSG2 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Ctdp1Q7TSG2 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ctdp1Q7TSG2 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ctdp1Q7TSG2 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Ctdp1Q7TSG2 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.52■□□□□ 0.4
Ctdp1Q7TSG2 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ctdp1Q7TSG2 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.52■□□□□ 0.4
Ctdp1Q7TSG2 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ctdp1Q7TSG2 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ctdp1Q7TSG2 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ctdp1Q7TSG2 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Ctdp1Q7TSG2 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.52■□□□□ 0.39
Ctdp1Q7TSG2 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ctdp1Q7TSG2 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Ctdp1Q7TSG2 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Ctdp1Q7TSG2 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ctdp1Q7TSG2 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ctdp1Q7TSG2 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ctdp1Q7TSG2 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ctdp1Q7TSG2 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ctdp1Q7TSG2 Gm29340-201ENSMUST00000188763 3854 ntBASIC17.51■□□□□ 0.39
Ctdp1Q7TSG2 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ctdp1Q7TSG2 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ctdp1Q7TSG2 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ctdp1Q7TSG2 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Ctdp1Q7TSG2 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ctdp1Q7TSG2 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ctdp1Q7TSG2 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.51■□□□□ 0.39
Ctdp1Q7TSG2 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.51■□□□□ 0.39
Ctdp1Q7TSG2 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ctdp1Q7TSG2 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ctdp1Q7TSG2 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ctdp1Q7TSG2 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms