Protein–RNA interactions for Protein: Q7TPQ3

Shprh, E3 ubiquitin-protein ligase SHPRH, mousemouse

Predictions only

Length 1,674 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShprhQ7TPQ3 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC22.55■■□□□ 1.2
ShprhQ7TPQ3 Gm5186-201ENSMUST00000218781 920 ntBASIC22.55■■□□□ 1.2
ShprhQ7TPQ3 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
ShprhQ7TPQ3 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ShprhQ7TPQ3 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
ShprhQ7TPQ3 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ShprhQ7TPQ3 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ShprhQ7TPQ3 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ShprhQ7TPQ3 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
ShprhQ7TPQ3 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
ShprhQ7TPQ3 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ShprhQ7TPQ3 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
ShprhQ7TPQ3 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ShprhQ7TPQ3 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ShprhQ7TPQ3 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
ShprhQ7TPQ3 Rprl2-201ENSMUST00000157150 290 ntBASIC22.55■■□□□ 1.2
ShprhQ7TPQ3 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC22.55■■□□□ 1.2
ShprhQ7TPQ3 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
ShprhQ7TPQ3 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
ShprhQ7TPQ3 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
ShprhQ7TPQ3 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ShprhQ7TPQ3 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
ShprhQ7TPQ3 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ShprhQ7TPQ3 Prkcz2-201ENSMUST00000206136 1756 ntBASIC22.54■■□□□ 1.2
ShprhQ7TPQ3 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
ShprhQ7TPQ3 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
ShprhQ7TPQ3 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC22.54■■□□□ 1.2
ShprhQ7TPQ3 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
ShprhQ7TPQ3 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC22.54■■□□□ 1.2
ShprhQ7TPQ3 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ShprhQ7TPQ3 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ShprhQ7TPQ3 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
ShprhQ7TPQ3 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
ShprhQ7TPQ3 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ShprhQ7TPQ3 Gm29361-201ENSMUST00000183323 2000 ntBASIC22.54■■□□□ 1.2
ShprhQ7TPQ3 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ShprhQ7TPQ3 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ShprhQ7TPQ3 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ShprhQ7TPQ3 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ShprhQ7TPQ3 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
ShprhQ7TPQ3 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
ShprhQ7TPQ3 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
ShprhQ7TPQ3 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
ShprhQ7TPQ3 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ShprhQ7TPQ3 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ShprhQ7TPQ3 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ShprhQ7TPQ3 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ShprhQ7TPQ3 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
ShprhQ7TPQ3 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
ShprhQ7TPQ3 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
ShprhQ7TPQ3 Gm9385-201ENSMUST00000117563 472 ntBASIC22.52■■□□□ 1.2
ShprhQ7TPQ3 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC22.52■■□□□ 1.2
ShprhQ7TPQ3 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
ShprhQ7TPQ3 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC22.52■■□□□ 1.2
ShprhQ7TPQ3 Gm18889-201ENSMUST00000174284 929 ntBASIC22.52■■□□□ 1.2
ShprhQ7TPQ3 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
ShprhQ7TPQ3 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
ShprhQ7TPQ3 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC22.52■■□□□ 1.2
ShprhQ7TPQ3 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC22.52■■□□□ 1.2
ShprhQ7TPQ3 Wdyhv1-206ENSMUST00000227142 786 ntBASIC22.52■■□□□ 1.2
ShprhQ7TPQ3 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ShprhQ7TPQ3 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
ShprhQ7TPQ3 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC22.52■■□□□ 1.2
ShprhQ7TPQ3 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC22.52■■□□□ 1.2
ShprhQ7TPQ3 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
ShprhQ7TPQ3 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
ShprhQ7TPQ3 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC22.52■■□□□ 1.2
ShprhQ7TPQ3 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ShprhQ7TPQ3 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC22.52■■□□□ 1.2
ShprhQ7TPQ3 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ShprhQ7TPQ3 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
ShprhQ7TPQ3 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ShprhQ7TPQ3 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
ShprhQ7TPQ3 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ShprhQ7TPQ3 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ShprhQ7TPQ3 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ShprhQ7TPQ3 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ShprhQ7TPQ3 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC22.51■■□□□ 1.19
ShprhQ7TPQ3 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ShprhQ7TPQ3 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ShprhQ7TPQ3 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
ShprhQ7TPQ3 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC22.51■■□□□ 1.19
ShprhQ7TPQ3 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ShprhQ7TPQ3 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ShprhQ7TPQ3 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
ShprhQ7TPQ3 Gm22065-201ENSMUST00000103753 110 ntBASIC22.51■■□□□ 1.19
ShprhQ7TPQ3 Gm22066-201ENSMUST00000103761 110 ntBASIC22.51■■□□□ 1.19
ShprhQ7TPQ3 Gm24932-201ENSMUST00000103763 110 ntBASIC22.51■■□□□ 1.19
ShprhQ7TPQ3 Gm24115-201ENSMUST00000103799 110 ntBASIC22.51■■□□□ 1.19
ShprhQ7TPQ3 Gm22190-201ENSMUST00000103827 110 ntBASIC22.51■■□□□ 1.19
ShprhQ7TPQ3 Gm22191-201ENSMUST00000103831 110 ntBASIC22.51■■□□□ 1.19
ShprhQ7TPQ3 Gm24721-201ENSMUST00000103849 110 ntBASIC22.51■■□□□ 1.19
ShprhQ7TPQ3 Gm28018-201ENSMUST00000103869 110 ntBASIC22.51■■□□□ 1.19
ShprhQ7TPQ3 Gm26399-201ENSMUST00000103937 110 ntBASIC22.51■■□□□ 1.19
ShprhQ7TPQ3 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC22.51■■□□□ 1.19
ShprhQ7TPQ3 Gm25349-201ENSMUST00000177728 110 ntBASIC22.51■■□□□ 1.19
ShprhQ7TPQ3 Gm23616-201ENSMUST00000177797 110 ntBASIC22.51■■□□□ 1.19
ShprhQ7TPQ3 Gm25871-201ENSMUST00000177816 110 ntBASIC22.51■■□□□ 1.19
ShprhQ7TPQ3 Gm24752-201ENSMUST00000178240 110 ntBASIC22.51■■□□□ 1.19
ShprhQ7TPQ3 Gm24496-201ENSMUST00000178287 110 ntBASIC22.51■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms