Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC19.28■□□□□ 0.68
Sned1Q70E20 CT030684.1-201ENSMUST00000227292 914 ntBASIC19.28■□□□□ 0.68
Sned1Q70E20 Rbfox2-208ENSMUST00000227930 1218 ntBASIC19.28■□□□□ 0.68
Sned1Q70E20 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sned1Q70E20 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sned1Q70E20 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sned1Q70E20 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sned1Q70E20 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sned1Q70E20 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sned1Q70E20 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC19.28■□□□□ 0.68
Sned1Q70E20 Iqck-206ENSMUST00000208658 2891 ntBASIC19.28■□□□□ 0.68
Sned1Q70E20 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sned1Q70E20 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sned1Q70E20 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sned1Q70E20 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sned1Q70E20 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.68
Sned1Q70E20 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sned1Q70E20 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sned1Q70E20 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC19.27■□□□□ 0.68
Sned1Q70E20 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC19.27■□□□□ 0.68
Sned1Q70E20 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC19.27■□□□□ 0.68
Sned1Q70E20 AC166341.4-201ENSMUST00000220625 123 ntBASIC19.27■□□□□ 0.68
Sned1Q70E20 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sned1Q70E20 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sned1Q70E20 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sned1Q70E20 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sned1Q70E20 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sned1Q70E20 Gm5184-201ENSMUST00000220417 1702 ntBASIC19.27■□□□□ 0.68
Sned1Q70E20 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC19.27■□□□□ 0.68
Sned1Q70E20 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sned1Q70E20 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sned1Q70E20 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sned1Q70E20 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sned1Q70E20 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sned1Q70E20 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sned1Q70E20 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC19.27■□□□□ 0.67
Sned1Q70E20 Gm11453-201ENSMUST00000117318 1007 ntBASIC19.26■□□□□ 0.67
Sned1Q70E20 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC19.26■□□□□ 0.67
Sned1Q70E20 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Sned1Q70E20 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sned1Q70E20 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC19.26■□□□□ 0.67
Sned1Q70E20 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC19.26■□□□□ 0.67
Sned1Q70E20 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sned1Q70E20 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sned1Q70E20 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sned1Q70E20 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sned1Q70E20 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sned1Q70E20 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sned1Q70E20 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sned1Q70E20 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sned1Q70E20 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sned1Q70E20 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Sned1Q70E20 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sned1Q70E20 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sned1Q70E20 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sned1Q70E20 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC19.25■□□□□ 0.67
Sned1Q70E20 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sned1Q70E20 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sned1Q70E20 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sned1Q70E20 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sned1Q70E20 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sned1Q70E20 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sned1Q70E20 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sned1Q70E20 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sned1Q70E20 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sned1Q70E20 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sned1Q70E20 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sned1Q70E20 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Sned1Q70E20 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sned1Q70E20 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sned1Q70E20 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sned1Q70E20 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Sned1Q70E20 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sned1Q70E20 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sned1Q70E20 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC19.25■□□□□ 0.67
Sned1Q70E20 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sned1Q70E20 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sned1Q70E20 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sned1Q70E20 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sned1Q70E20 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Sned1Q70E20 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sned1Q70E20 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Sned1Q70E20 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sned1Q70E20 Gm12017-201ENSMUST00000122453 1003 ntBASIC19.24■□□□□ 0.67
Sned1Q70E20 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC19.24■□□□□ 0.67
Sned1Q70E20 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sned1Q70E20 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC19.24■□□□□ 0.67
Sned1Q70E20 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC19.24■□□□□ 0.67
Sned1Q70E20 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Sned1Q70E20 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC19.24■□□□□ 0.67
Sned1Q70E20 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC19.24■□□□□ 0.67
Sned1Q70E20 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sned1Q70E20 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Sned1Q70E20 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sned1Q70E20 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Sned1Q70E20 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Sned1Q70E20 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sned1Q70E20 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sned1Q70E20 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sned1Q70E20 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms