Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm13616-201ENSMUST00000120600 222 ntBASIC18.2■□□□□ 0.5
Ddx55Q6ZPL9 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx55Q6ZPL9 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Ddx55Q6ZPL9 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx55Q6ZPL9 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx55Q6ZPL9 Gm45747-201ENSMUST00000212203 999 ntBASIC18.2■□□□□ 0.5
Ddx55Q6ZPL9 AC151836.1-202ENSMUST00000226259 753 ntBASIC18.2■□□□□ 0.5
Ddx55Q6ZPL9 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Ddx55Q6ZPL9 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx55Q6ZPL9 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx55Q6ZPL9 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx55Q6ZPL9 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx55Q6ZPL9 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx55Q6ZPL9 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx55Q6ZPL9 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx55Q6ZPL9 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx55Q6ZPL9 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx55Q6ZPL9 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.19■□□□□ 0.5
Ddx55Q6ZPL9 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx55Q6ZPL9 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
Ddx55Q6ZPL9 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx55Q6ZPL9 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx55Q6ZPL9 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx55Q6ZPL9 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx55Q6ZPL9 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.19■□□□□ 0.5
Ddx55Q6ZPL9 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx55Q6ZPL9 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx55Q6ZPL9 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC18.19■□□□□ 0.5
Ddx55Q6ZPL9 Gm45612-201ENSMUST00000211320 160 ntBASIC18.19■□□□□ 0.5
Ddx55Q6ZPL9 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx55Q6ZPL9 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx55Q6ZPL9 AC155252.2-201ENSMUST00000226946 680 ntBASIC18.19■□□□□ 0.5
Ddx55Q6ZPL9 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx55Q6ZPL9 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx55Q6ZPL9 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx55Q6ZPL9 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Ddx55Q6ZPL9 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx55Q6ZPL9 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Ddx55Q6ZPL9 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC18.19■□□□□ 0.5
Ddx55Q6ZPL9 Gm13294-201ENSMUST00000121757 1330 ntBASIC18.19■□□□□ 0.5
Ddx55Q6ZPL9 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Ddx55Q6ZPL9 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx55Q6ZPL9 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx55Q6ZPL9 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx55Q6ZPL9 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Ddx55Q6ZPL9 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx55Q6ZPL9 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx55Q6ZPL9 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx55Q6ZPL9 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx55Q6ZPL9 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx55Q6ZPL9 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx55Q6ZPL9 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Ddx55Q6ZPL9 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Ddx55Q6ZPL9 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Ddx55Q6ZPL9 Mir7036b-201ENSMUST00000184791 63 ntBASIC18.18■□□□□ 0.5
Ddx55Q6ZPL9 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx55Q6ZPL9 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx55Q6ZPL9 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx55Q6ZPL9 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx55Q6ZPL9 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Ddx55Q6ZPL9 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx55Q6ZPL9 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Ddx55Q6ZPL9 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx55Q6ZPL9 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Ddx55Q6ZPL9 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.17■□□□□ 0.5
Ddx55Q6ZPL9 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx55Q6ZPL9 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx55Q6ZPL9 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx55Q6ZPL9 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Ddx55Q6ZPL9 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx55Q6ZPL9 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Ddx55Q6ZPL9 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx55Q6ZPL9 Gm15427-201ENSMUST00000117288 531 ntBASIC18.17■□□□□ 0.5
Ddx55Q6ZPL9 Gm12892-201ENSMUST00000117367 1146 ntBASIC18.17■□□□□ 0.5
Ddx55Q6ZPL9 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC18.17■□□□□ 0.5
Ddx55Q6ZPL9 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx55Q6ZPL9 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx55Q6ZPL9 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC18.17■□□□□ 0.5
Ddx55Q6ZPL9 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC18.17■□□□□ 0.5
Ddx55Q6ZPL9 Gm5177-201ENSMUST00000183092 997 ntBASIC18.17■□□□□ 0.5
Ddx55Q6ZPL9 Gm19164-201ENSMUST00000210667 640 ntBASIC18.17■□□□□ 0.5
Ddx55Q6ZPL9 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx55Q6ZPL9 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Ddx55Q6ZPL9 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx55Q6ZPL9 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx55Q6ZPL9 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx55Q6ZPL9 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx55Q6ZPL9 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx55Q6ZPL9 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC18.16■□□□□ 0.5
Ddx55Q6ZPL9 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC18.16■□□□□ 0.5
Ddx55Q6ZPL9 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx55Q6ZPL9 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC18.16■□□□□ 0.5
Ddx55Q6ZPL9 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx55Q6ZPL9 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Ddx55Q6ZPL9 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx55Q6ZPL9 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC18.16■□□□□ 0.5
Ddx55Q6ZPL9 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Ddx55Q6ZPL9 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx55Q6ZPL9 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx55Q6ZPL9 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms