Protein–RNA interactions for Protein: Q6TDU8

Casc1, Protein CASC1, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc1Q6TDU8 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Casc1Q6TDU8 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Casc1Q6TDU8 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Casc1Q6TDU8 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Casc1Q6TDU8 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Casc1Q6TDU8 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Casc1Q6TDU8 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Casc1Q6TDU8 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Casc1Q6TDU8 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Casc1Q6TDU8 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Casc1Q6TDU8 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Casc1Q6TDU8 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Casc1Q6TDU8 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Casc1Q6TDU8 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Casc1Q6TDU8 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Casc1Q6TDU8 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Casc1Q6TDU8 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Casc1Q6TDU8 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC19.19■□□□□ 0.66
Casc1Q6TDU8 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.19■□□□□ 0.66
Casc1Q6TDU8 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.19■□□□□ 0.66
Casc1Q6TDU8 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Casc1Q6TDU8 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Casc1Q6TDU8 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC19.19■□□□□ 0.66
Casc1Q6TDU8 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Casc1Q6TDU8 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Casc1Q6TDU8 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC19.19■□□□□ 0.66
Casc1Q6TDU8 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Casc1Q6TDU8 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC19.19■□□□□ 0.66
Casc1Q6TDU8 AC154231.1-201ENSMUST00000220564 2175 ntBASIC19.19■□□□□ 0.66
Casc1Q6TDU8 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Casc1Q6TDU8 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Casc1Q6TDU8 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Casc1Q6TDU8 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Casc1Q6TDU8 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Casc1Q6TDU8 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Casc1Q6TDU8 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Casc1Q6TDU8 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Casc1Q6TDU8 Gm11355-201ENSMUST00000121120 306 ntBASIC19.18■□□□□ 0.66
Casc1Q6TDU8 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Casc1Q6TDU8 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC19.18■□□□□ 0.66
Casc1Q6TDU8 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Casc1Q6TDU8 AC130671.1-201ENSMUST00000227384 1237 ntBASIC19.18■□□□□ 0.66
Casc1Q6TDU8 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Casc1Q6TDU8 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC19.18■□□□□ 0.66
Casc1Q6TDU8 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Casc1Q6TDU8 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Casc1Q6TDU8 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC19.18■□□□□ 0.66
Casc1Q6TDU8 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Casc1Q6TDU8 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Casc1Q6TDU8 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Casc1Q6TDU8 Gm43072-201ENSMUST00000200283 1671 ntBASIC19.17■□□□□ 0.66
Casc1Q6TDU8 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Casc1Q6TDU8 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Casc1Q6TDU8 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Casc1Q6TDU8 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.17■□□□□ 0.66
Casc1Q6TDU8 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Casc1Q6TDU8 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Casc1Q6TDU8 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Casc1Q6TDU8 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Casc1Q6TDU8 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Casc1Q6TDU8 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Casc1Q6TDU8 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.17■□□□□ 0.66
Casc1Q6TDU8 Gm6345-202ENSMUST00000180900 204 ntBASIC19.17■□□□□ 0.66
Casc1Q6TDU8 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Casc1Q6TDU8 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Casc1Q6TDU8 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Casc1Q6TDU8 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Casc1Q6TDU8 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Casc1Q6TDU8 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC19.17■□□□□ 0.66
Casc1Q6TDU8 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Casc1Q6TDU8 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.16■□□□□ 0.66
Casc1Q6TDU8 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Casc1Q6TDU8 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Casc1Q6TDU8 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Casc1Q6TDU8 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Casc1Q6TDU8 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Casc1Q6TDU8 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.16■□□□□ 0.66
Casc1Q6TDU8 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Casc1Q6TDU8 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC19.16■□□□□ 0.66
Casc1Q6TDU8 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Casc1Q6TDU8 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Casc1Q6TDU8 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Casc1Q6TDU8 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Casc1Q6TDU8 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Casc1Q6TDU8 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Casc1Q6TDU8 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Casc1Q6TDU8 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Casc1Q6TDU8 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Casc1Q6TDU8 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Casc1Q6TDU8 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Casc1Q6TDU8 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Casc1Q6TDU8 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Casc1Q6TDU8 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Casc1Q6TDU8 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Casc1Q6TDU8 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Casc1Q6TDU8 Wnt10b-204ENSMUST00000226655 1807 ntBASIC19.16■□□□□ 0.66
Casc1Q6TDU8 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Casc1Q6TDU8 Gm8258-201ENSMUST00000055593 1449 ntBASIC19.16■□□□□ 0.66
Casc1Q6TDU8 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Casc1Q6TDU8 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms