Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC18.06■□□□□ 0.48
Scn10aQ6QIY3 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scn10aQ6QIY3 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scn10aQ6QIY3 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Scn10aQ6QIY3 Gm5184-201ENSMUST00000220417 1702 ntBASIC18.06■□□□□ 0.48
Scn10aQ6QIY3 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC18.06■□□□□ 0.48
Scn10aQ6QIY3 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scn10aQ6QIY3 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.06■□□□□ 0.48
Scn10aQ6QIY3 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scn10aQ6QIY3 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC18.06■□□□□ 0.48
Scn10aQ6QIY3 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.06■□□□□ 0.48
Scn10aQ6QIY3 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Scn10aQ6QIY3 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
Scn10aQ6QIY3 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC18.06■□□□□ 0.48
Scn10aQ6QIY3 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scn10aQ6QIY3 Gm7774-201ENSMUST00000200064 533 ntBASIC18.06■□□□□ 0.48
Scn10aQ6QIY3 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC18.06■□□□□ 0.48
Scn10aQ6QIY3 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn10aQ6QIY3 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Scn10aQ6QIY3 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn10aQ6QIY3 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Scn10aQ6QIY3 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn10aQ6QIY3 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn10aQ6QIY3 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn10aQ6QIY3 Gm10253-201ENSMUST00000194270 940 ntBASIC18.05■□□□□ 0.48
Scn10aQ6QIY3 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC18.05■□□□□ 0.48
Scn10aQ6QIY3 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn10aQ6QIY3 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn10aQ6QIY3 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn10aQ6QIY3 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn10aQ6QIY3 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Scn10aQ6QIY3 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Scn10aQ6QIY3 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn10aQ6QIY3 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn10aQ6QIY3 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn10aQ6QIY3 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn10aQ6QIY3 Gm7286-201ENSMUST00000182691 1007 ntBASIC18.04■□□□□ 0.48
Scn10aQ6QIY3 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC18.04■□□□□ 0.48
Scn10aQ6QIY3 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC18.04■□□□□ 0.48
Scn10aQ6QIY3 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC18.04■□□□□ 0.48
Scn10aQ6QIY3 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn10aQ6QIY3 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Scn10aQ6QIY3 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn10aQ6QIY3 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Scn10aQ6QIY3 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn10aQ6QIY3 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn10aQ6QIY3 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Scn10aQ6QIY3 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC18.04■□□□□ 0.48
Scn10aQ6QIY3 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Scn10aQ6QIY3 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC18.04■□□□□ 0.48
Scn10aQ6QIY3 AC124732.2-201ENSMUST00000221977 316 ntBASIC18.04■□□□□ 0.48
Scn10aQ6QIY3 Gm5626-201ENSMUST00000222151 1058 ntBASIC18.04■□□□□ 0.48
Scn10aQ6QIY3 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn10aQ6QIY3 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Scn10aQ6QIY3 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn10aQ6QIY3 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Scn10aQ6QIY3 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Scn10aQ6QIY3 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scn10aQ6QIY3 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scn10aQ6QIY3 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Scn10aQ6QIY3 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scn10aQ6QIY3 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scn10aQ6QIY3 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC18.03■□□□□ 0.48
Scn10aQ6QIY3 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Scn10aQ6QIY3 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC18.03■□□□□ 0.48
Scn10aQ6QIY3 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC18.03■□□□□ 0.48
Scn10aQ6QIY3 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scn10aQ6QIY3 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC18.03■□□□□ 0.48
Scn10aQ6QIY3 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scn10aQ6QIY3 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
Scn10aQ6QIY3 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Scn10aQ6QIY3 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scn10aQ6QIY3 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scn10aQ6QIY3 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scn10aQ6QIY3 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Scn10aQ6QIY3 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scn10aQ6QIY3 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scn10aQ6QIY3 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
Scn10aQ6QIY3 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC18.02■□□□□ 0.48
Scn10aQ6QIY3 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scn10aQ6QIY3 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Scn10aQ6QIY3 AC166341.4-201ENSMUST00000220625 123 ntBASIC18.02■□□□□ 0.48
Scn10aQ6QIY3 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Scn10aQ6QIY3 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scn10aQ6QIY3 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scn10aQ6QIY3 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scn10aQ6QIY3 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Scn10aQ6QIY3 Gm13223-201ENSMUST00000118609 747 ntBASIC18.02■□□□□ 0.47
Scn10aQ6QIY3 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC18.02■□□□□ 0.47
Scn10aQ6QIY3 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC18.02■□□□□ 0.47
Scn10aQ6QIY3 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Scn10aQ6QIY3 CT025535.1-201ENSMUST00000227172 491 ntBASIC18.02■□□□□ 0.47
Scn10aQ6QIY3 AC131710.1-201ENSMUST00000228336 990 ntBASIC18.02■□□□□ 0.47
Scn10aQ6QIY3 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Scn10aQ6QIY3 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Scn10aQ6QIY3 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Scn10aQ6QIY3 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Scn10aQ6QIY3 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scn10aQ6QIY3 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scn10aQ6QIY3 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms