Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ShbQ6PD21 Gm15693-201ENSMUST00000120470 637 ntBASIC17.28■□□□□ 0.36
ShbQ6PD21 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ShbQ6PD21 Gm27618-201ENSMUST00000183671 60 ntBASIC17.28■□□□□ 0.36
ShbQ6PD21 AC158538.2-201ENSMUST00000225455 906 ntBASIC17.28■□□□□ 0.36
ShbQ6PD21 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ShbQ6PD21 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ShbQ6PD21 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ShbQ6PD21 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ShbQ6PD21 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
ShbQ6PD21 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.28■□□□□ 0.36
ShbQ6PD21 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ShbQ6PD21 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.28■□□□□ 0.36
ShbQ6PD21 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ShbQ6PD21 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ShbQ6PD21 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ShbQ6PD21 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ShbQ6PD21 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.27■□□□□ 0.36
ShbQ6PD21 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ShbQ6PD21 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ShbQ6PD21 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ShbQ6PD21 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ShbQ6PD21 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ShbQ6PD21 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
ShbQ6PD21 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC17.27■□□□□ 0.36
ShbQ6PD21 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ShbQ6PD21 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ShbQ6PD21 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ShbQ6PD21 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ShbQ6PD21 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ShbQ6PD21 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ShbQ6PD21 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ShbQ6PD21 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ShbQ6PD21 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ShbQ6PD21 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ShbQ6PD21 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
ShbQ6PD21 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
ShbQ6PD21 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.27■□□□□ 0.35
ShbQ6PD21 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.27■□□□□ 0.35
ShbQ6PD21 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
ShbQ6PD21 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
ShbQ6PD21 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ShbQ6PD21 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ShbQ6PD21 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ShbQ6PD21 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
ShbQ6PD21 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ShbQ6PD21 Gm14127-201ENSMUST00000117906 678 ntBASIC17.26■□□□□ 0.35
ShbQ6PD21 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
ShbQ6PD21 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17.26■□□□□ 0.35
ShbQ6PD21 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ShbQ6PD21 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
ShbQ6PD21 CT025555.1-201ENSMUST00000225901 1217 ntBASIC17.26■□□□□ 0.35
ShbQ6PD21 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ShbQ6PD21 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
ShbQ6PD21 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ShbQ6PD21 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ShbQ6PD21 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
ShbQ6PD21 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.25■□□□□ 0.35
ShbQ6PD21 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ShbQ6PD21 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ShbQ6PD21 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ShbQ6PD21 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ShbQ6PD21 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ShbQ6PD21 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ShbQ6PD21 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.25■□□□□ 0.35
ShbQ6PD21 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
ShbQ6PD21 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ShbQ6PD21 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC17.25■□□□□ 0.35
ShbQ6PD21 Gm12008-201ENSMUST00000117791 755 ntBASIC17.25■□□□□ 0.35
ShbQ6PD21 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ShbQ6PD21 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ShbQ6PD21 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ShbQ6PD21 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
ShbQ6PD21 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
ShbQ6PD21 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ShbQ6PD21 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ShbQ6PD21 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ShbQ6PD21 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.25■□□□□ 0.35
ShbQ6PD21 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ShbQ6PD21 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ShbQ6PD21 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ShbQ6PD21 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ShbQ6PD21 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ShbQ6PD21 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ShbQ6PD21 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ShbQ6PD21 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ShbQ6PD21 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
ShbQ6PD21 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.24■□□□□ 0.35
ShbQ6PD21 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC17.24■□□□□ 0.35
ShbQ6PD21 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC17.24■□□□□ 0.35
ShbQ6PD21 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ShbQ6PD21 Gm27989-201ENSMUST00000184721 107 ntBASIC17.24■□□□□ 0.35
ShbQ6PD21 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC17.24■□□□□ 0.35
ShbQ6PD21 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ShbQ6PD21 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ShbQ6PD21 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ShbQ6PD21 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ShbQ6PD21 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
ShbQ6PD21 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ShbQ6PD21 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms