Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarcd3Q6P9Z1 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Smarcd3Q6P9Z1 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.76□□□□□ -0.05
Smarcd3Q6P9Z1 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC14.76□□□□□ -0.05
Smarcd3Q6P9Z1 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarcd3Q6P9Z1 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarcd3Q6P9Z1 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Smarcd3Q6P9Z1 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarcd3Q6P9Z1 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Smarcd3Q6P9Z1 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarcd3Q6P9Z1 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Smarcd3Q6P9Z1 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarcd3Q6P9Z1 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarcd3Q6P9Z1 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.76□□□□□ -0.05
Smarcd3Q6P9Z1 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.76□□□□□ -0.05
Smarcd3Q6P9Z1 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarcd3Q6P9Z1 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarcd3Q6P9Z1 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarcd3Q6P9Z1 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Smarcd3Q6P9Z1 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcd3Q6P9Z1 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcd3Q6P9Z1 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcd3Q6P9Z1 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcd3Q6P9Z1 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcd3Q6P9Z1 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcd3Q6P9Z1 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcd3Q6P9Z1 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcd3Q6P9Z1 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Smarcd3Q6P9Z1 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcd3Q6P9Z1 Gm13474-201ENSMUST00000122466 815 ntBASIC14.75□□□□□ -0.05
Smarcd3Q6P9Z1 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcd3Q6P9Z1 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
Smarcd3Q6P9Z1 Gm5417-201ENSMUST00000079706 384 ntBASIC14.75□□□□□ -0.05
Smarcd3Q6P9Z1 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcd3Q6P9Z1 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcd3Q6P9Z1 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.75□□□□□ -0.05
Smarcd3Q6P9Z1 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcd3Q6P9Z1 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Smarcd3Q6P9Z1 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcd3Q6P9Z1 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcd3Q6P9Z1 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcd3Q6P9Z1 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Smarcd3Q6P9Z1 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcd3Q6P9Z1 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.75□□□□□ -0.05
Smarcd3Q6P9Z1 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcd3Q6P9Z1 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcd3Q6P9Z1 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcd3Q6P9Z1 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcd3Q6P9Z1 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcd3Q6P9Z1 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcd3Q6P9Z1 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcd3Q6P9Z1 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcd3Q6P9Z1 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.74□□□□□ -0.05
Smarcd3Q6P9Z1 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcd3Q6P9Z1 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcd3Q6P9Z1 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcd3Q6P9Z1 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcd3Q6P9Z1 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC14.74□□□□□ -0.05
Smarcd3Q6P9Z1 Gm16061-201ENSMUST00000122167 857 ntBASIC14.74□□□□□ -0.05
Smarcd3Q6P9Z1 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcd3Q6P9Z1 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Smarcd3Q6P9Z1 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.74□□□□□ -0.05
Smarcd3Q6P9Z1 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.74□□□□□ -0.05
Smarcd3Q6P9Z1 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcd3Q6P9Z1 Gm2274-201ENSMUST00000184539 609 ntBASIC14.74□□□□□ -0.05
Smarcd3Q6P9Z1 Gm10252-201ENSMUST00000209541 832 ntBASIC14.74□□□□□ -0.05
Smarcd3Q6P9Z1 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcd3Q6P9Z1 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcd3Q6P9Z1 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcd3Q6P9Z1 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcd3Q6P9Z1 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.74□□□□□ -0.05
Smarcd3Q6P9Z1 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcd3Q6P9Z1 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcd3Q6P9Z1 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcd3Q6P9Z1 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Smarcd3Q6P9Z1 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcd3Q6P9Z1 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Smarcd3Q6P9Z1 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcd3Q6P9Z1 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcd3Q6P9Z1 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcd3Q6P9Z1 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcd3Q6P9Z1 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcd3Q6P9Z1 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.73□□□□□ -0.05
Smarcd3Q6P9Z1 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcd3Q6P9Z1 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcd3Q6P9Z1 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcd3Q6P9Z1 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcd3Q6P9Z1 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcd3Q6P9Z1 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcd3Q6P9Z1 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcd3Q6P9Z1 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcd3Q6P9Z1 Gm18421-201ENSMUST00000204122 625 ntBASIC14.73□□□□□ -0.05
Smarcd3Q6P9Z1 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Smarcd3Q6P9Z1 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcd3Q6P9Z1 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcd3Q6P9Z1 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Smarcd3Q6P9Z1 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcd3Q6P9Z1 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.73□□□□□ -0.05
Smarcd3Q6P9Z1 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcd3Q6P9Z1 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms