Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgb4Q6P8W9 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgb4Q6P8W9 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.79■□□□□ 0.28
Hmgb4Q6P8W9 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hmgb4Q6P8W9 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Hmgb4Q6P8W9 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hmgb4Q6P8W9 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hmgb4Q6P8W9 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Hmgb4Q6P8W9 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hmgb4Q6P8W9 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hmgb4Q6P8W9 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hmgb4Q6P8W9 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hmgb4Q6P8W9 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.79■□□□□ 0.28
Hmgb4Q6P8W9 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.79■□□□□ 0.28
Hmgb4Q6P8W9 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Hmgb4Q6P8W9 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.79■□□□□ 0.28
Hmgb4Q6P8W9 Rps4l-201ENSMUST00000071745 943 ntBASIC16.79■□□□□ 0.28
Hmgb4Q6P8W9 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Hmgb4Q6P8W9 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Hmgb4Q6P8W9 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Hmgb4Q6P8W9 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hmgb4Q6P8W9 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hmgb4Q6P8W9 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hmgb4Q6P8W9 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
Hmgb4Q6P8W9 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmgb4Q6P8W9 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Hmgb4Q6P8W9 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Hmgb4Q6P8W9 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmgb4Q6P8W9 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmgb4Q6P8W9 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmgb4Q6P8W9 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Hmgb4Q6P8W9 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmgb4Q6P8W9 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.78■□□□□ 0.28
Hmgb4Q6P8W9 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Hmgb4Q6P8W9 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.78■□□□□ 0.28
Hmgb4Q6P8W9 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Hmgb4Q6P8W9 Gm6296-201ENSMUST00000222599 943 ntBASIC16.78■□□□□ 0.28
Hmgb4Q6P8W9 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmgb4Q6P8W9 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmgb4Q6P8W9 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmgb4Q6P8W9 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hmgb4Q6P8W9 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hmgb4Q6P8W9 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hmgb4Q6P8W9 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hmgb4Q6P8W9 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Hmgb4Q6P8W9 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hmgb4Q6P8W9 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.77■□□□□ 0.28
Hmgb4Q6P8W9 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.77■□□□□ 0.28
Hmgb4Q6P8W9 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Hmgb4Q6P8W9 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hmgb4Q6P8W9 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Hmgb4Q6P8W9 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Hmgb4Q6P8W9 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.77■□□□□ 0.28
Hmgb4Q6P8W9 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Hmgb4Q6P8W9 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hmgb4Q6P8W9 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hmgb4Q6P8W9 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hmgb4Q6P8W9 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hmgb4Q6P8W9 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Hmgb4Q6P8W9 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hmgb4Q6P8W9 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.77■□□□□ 0.27
Hmgb4Q6P8W9 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hmgb4Q6P8W9 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Hmgb4Q6P8W9 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hmgb4Q6P8W9 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hmgb4Q6P8W9 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Hmgb4Q6P8W9 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hmgb4Q6P8W9 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Hmgb4Q6P8W9 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.76■□□□□ 0.27
Hmgb4Q6P8W9 Gm2651-201ENSMUST00000203560 838 ntBASIC16.76■□□□□ 0.27
Hmgb4Q6P8W9 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hmgb4Q6P8W9 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Hmgb4Q6P8W9 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Hmgb4Q6P8W9 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hmgb4Q6P8W9 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Hmgb4Q6P8W9 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.76■□□□□ 0.27
Hmgb4Q6P8W9 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hmgb4Q6P8W9 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hmgb4Q6P8W9 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hmgb4Q6P8W9 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hmgb4Q6P8W9 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hmgb4Q6P8W9 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hmgb4Q6P8W9 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Hmgb4Q6P8W9 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Hmgb4Q6P8W9 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Hmgb4Q6P8W9 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Hmgb4Q6P8W9 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmgb4Q6P8W9 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmgb4Q6P8W9 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmgb4Q6P8W9 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmgb4Q6P8W9 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmgb4Q6P8W9 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmgb4Q6P8W9 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmgb4Q6P8W9 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.75■□□□□ 0.27
Hmgb4Q6P8W9 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Hmgb4Q6P8W9 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.75■□□□□ 0.27
Hmgb4Q6P8W9 Gm44357-201ENSMUST00000195897 142 ntBASIC16.75■□□□□ 0.27
Hmgb4Q6P8W9 Gm19658-201ENSMUST00000196231 138 ntBASIC16.75■□□□□ 0.27
Hmgb4Q6P8W9 Gm44367-201ENSMUST00000196836 138 ntBASIC16.75■□□□□ 0.27
Hmgb4Q6P8W9 Gm44350-201ENSMUST00000197197 138 ntBASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms