Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smchd1Q6P5D8 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smchd1Q6P5D8 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smchd1Q6P5D8 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smchd1Q6P5D8 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smchd1Q6P5D8 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smchd1Q6P5D8 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smchd1Q6P5D8 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Smchd1Q6P5D8 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smchd1Q6P5D8 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smchd1Q6P5D8 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smchd1Q6P5D8 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smchd1Q6P5D8 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.56■□□□□ 0.4
Smchd1Q6P5D8 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smchd1Q6P5D8 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smchd1Q6P5D8 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Smchd1Q6P5D8 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smchd1Q6P5D8 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smchd1Q6P5D8 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smchd1Q6P5D8 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smchd1Q6P5D8 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smchd1Q6P5D8 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smchd1Q6P5D8 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smchd1Q6P5D8 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smchd1Q6P5D8 Gm14140-201ENSMUST00000119999 995 ntBASIC17.55■□□□□ 0.4
Smchd1Q6P5D8 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.55■□□□□ 0.4
Smchd1Q6P5D8 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
Smchd1Q6P5D8 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Smchd1Q6P5D8 Gm42670-201ENSMUST00000201816 1292 ntBASIC17.55■□□□□ 0.4
Smchd1Q6P5D8 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.55■□□□□ 0.4
Smchd1Q6P5D8 AC132104.2-201ENSMUST00000215011 266 ntBASIC17.55■□□□□ 0.4
Smchd1Q6P5D8 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smchd1Q6P5D8 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smchd1Q6P5D8 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Smchd1Q6P5D8 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Smchd1Q6P5D8 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smchd1Q6P5D8 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smchd1Q6P5D8 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Smchd1Q6P5D8 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smchd1Q6P5D8 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smchd1Q6P5D8 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smchd1Q6P5D8 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17.55■□□□□ 0.4
Smchd1Q6P5D8 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.55■□□□□ 0.4
Smchd1Q6P5D8 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC17.55■□□□□ 0.4
Smchd1Q6P5D8 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17.55■□□□□ 0.4
Smchd1Q6P5D8 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smchd1Q6P5D8 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Smchd1Q6P5D8 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smchd1Q6P5D8 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smchd1Q6P5D8 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smchd1Q6P5D8 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smchd1Q6P5D8 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smchd1Q6P5D8 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smchd1Q6P5D8 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smchd1Q6P5D8 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Smchd1Q6P5D8 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Smchd1Q6P5D8 Gm8344-201ENSMUST00000119813 856 ntBASIC17.54■□□□□ 0.4
Smchd1Q6P5D8 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smchd1Q6P5D8 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC17.54■□□□□ 0.4
Smchd1Q6P5D8 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smchd1Q6P5D8 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Smchd1Q6P5D8 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smchd1Q6P5D8 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.54■□□□□ 0.4
Smchd1Q6P5D8 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smchd1Q6P5D8 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smchd1Q6P5D8 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Smchd1Q6P5D8 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Smchd1Q6P5D8 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smchd1Q6P5D8 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Smchd1Q6P5D8 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Smchd1Q6P5D8 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.54■□□□□ 0.4
Smchd1Q6P5D8 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smchd1Q6P5D8 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.53■□□□□ 0.4
Smchd1Q6P5D8 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Smchd1Q6P5D8 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.53■□□□□ 0.4
Smchd1Q6P5D8 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smchd1Q6P5D8 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smchd1Q6P5D8 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smchd1Q6P5D8 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smchd1Q6P5D8 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smchd1Q6P5D8 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smchd1Q6P5D8 Gm11764-201ENSMUST00000120221 623 ntBASIC17.53■□□□□ 0.4
Smchd1Q6P5D8 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smchd1Q6P5D8 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smchd1Q6P5D8 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smchd1Q6P5D8 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smchd1Q6P5D8 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Smchd1Q6P5D8 Gm37500-201ENSMUST00000192059 1443 ntBASIC17.53■□□□□ 0.4
Smchd1Q6P5D8 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smchd1Q6P5D8 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Smchd1Q6P5D8 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smchd1Q6P5D8 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.53■□□□□ 0.4
Smchd1Q6P5D8 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smchd1Q6P5D8 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smchd1Q6P5D8 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Smchd1Q6P5D8 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Smchd1Q6P5D8 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smchd1Q6P5D8 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smchd1Q6P5D8 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smchd1Q6P5D8 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms