Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rtl3Q6P1Y1 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rtl3Q6P1Y1 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Rtl3Q6P1Y1 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rtl3Q6P1Y1 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rtl3Q6P1Y1 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.56■□□□□ 0.24
Rtl3Q6P1Y1 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rtl3Q6P1Y1 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rtl3Q6P1Y1 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.56■□□□□ 0.24
Rtl3Q6P1Y1 Gm44454-201ENSMUST00000198541 138 ntBASIC16.56■□□□□ 0.24
Rtl3Q6P1Y1 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rtl3Q6P1Y1 Gm6443-201ENSMUST00000203599 874 ntBASIC16.56■□□□□ 0.24
Rtl3Q6P1Y1 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.56■□□□□ 0.24
Rtl3Q6P1Y1 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Rtl3Q6P1Y1 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rtl3Q6P1Y1 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rtl3Q6P1Y1 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rtl3Q6P1Y1 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rtl3Q6P1Y1 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rtl3Q6P1Y1 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rtl3Q6P1Y1 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rtl3Q6P1Y1 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rtl3Q6P1Y1 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rtl3Q6P1Y1 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Rtl3Q6P1Y1 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rtl3Q6P1Y1 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.55■□□□□ 0.24
Rtl3Q6P1Y1 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rtl3Q6P1Y1 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rtl3Q6P1Y1 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.55■□□□□ 0.24
Rtl3Q6P1Y1 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rtl3Q6P1Y1 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rtl3Q6P1Y1 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rtl3Q6P1Y1 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rtl3Q6P1Y1 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rtl3Q6P1Y1 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Rtl3Q6P1Y1 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rtl3Q6P1Y1 Gm13884-201ENSMUST00000118103 829 ntBASIC16.55■□□□□ 0.24
Rtl3Q6P1Y1 Gm15165-201ENSMUST00000118140 502 ntBASIC16.55■□□□□ 0.24
Rtl3Q6P1Y1 Mir8098-201ENSMUST00000184011 137 ntBASIC16.55■□□□□ 0.24
Rtl3Q6P1Y1 Gm27867-201ENSMUST00000184778 125 ntBASIC16.55■□□□□ 0.24
Rtl3Q6P1Y1 Gm43347-201ENSMUST00000200226 580 ntBASIC16.55■□□□□ 0.24
Rtl3Q6P1Y1 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.55■□□□□ 0.24
Rtl3Q6P1Y1 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rtl3Q6P1Y1 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Rtl3Q6P1Y1 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rtl3Q6P1Y1 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rtl3Q6P1Y1 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rtl3Q6P1Y1 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rtl3Q6P1Y1 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rtl3Q6P1Y1 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rtl3Q6P1Y1 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rtl3Q6P1Y1 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rtl3Q6P1Y1 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rtl3Q6P1Y1 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Rtl3Q6P1Y1 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rtl3Q6P1Y1 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rtl3Q6P1Y1 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rtl3Q6P1Y1 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rtl3Q6P1Y1 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.54■□□□□ 0.24
Rtl3Q6P1Y1 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rtl3Q6P1Y1 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.54■□□□□ 0.24
Rtl3Q6P1Y1 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
Rtl3Q6P1Y1 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rtl3Q6P1Y1 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rtl3Q6P1Y1 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rtl3Q6P1Y1 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Rtl3Q6P1Y1 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rtl3Q6P1Y1 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rtl3Q6P1Y1 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rtl3Q6P1Y1 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rtl3Q6P1Y1 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rtl3Q6P1Y1 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rtl3Q6P1Y1 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rtl3Q6P1Y1 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rtl3Q6P1Y1 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Rtl3Q6P1Y1 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Rtl3Q6P1Y1 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Rtl3Q6P1Y1 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtl3Q6P1Y1 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtl3Q6P1Y1 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rtl3Q6P1Y1 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtl3Q6P1Y1 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Rtl3Q6P1Y1 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtl3Q6P1Y1 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Rtl3Q6P1Y1 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtl3Q6P1Y1 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtl3Q6P1Y1 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtl3Q6P1Y1 Gm15372-201ENSMUST00000120729 834 ntBASIC16.53■□□□□ 0.24
Rtl3Q6P1Y1 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rtl3Q6P1Y1 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rtl3Q6P1Y1 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtl3Q6P1Y1 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.53■□□□□ 0.24
Rtl3Q6P1Y1 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.53■□□□□ 0.24
Rtl3Q6P1Y1 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtl3Q6P1Y1 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtl3Q6P1Y1 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtl3Q6P1Y1 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtl3Q6P1Y1 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rtl3Q6P1Y1 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Rtl3Q6P1Y1 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms