Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac4Q6NZM9 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac4Q6NZM9 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac4Q6NZM9 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac4Q6NZM9 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac4Q6NZM9 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.97■□□□□ 0.47
Hdac4Q6NZM9 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac4Q6NZM9 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac4Q6NZM9 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hdac4Q6NZM9 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hdac4Q6NZM9 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hdac4Q6NZM9 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hdac4Q6NZM9 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hdac4Q6NZM9 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hdac4Q6NZM9 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Hdac4Q6NZM9 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hdac4Q6NZM9 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Hdac4Q6NZM9 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Hdac4Q6NZM9 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hdac4Q6NZM9 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hdac4Q6NZM9 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Hdac4Q6NZM9 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Hdac4Q6NZM9 Gm13312-201ENSMUST00000119631 718 ntBASIC17.95■□□□□ 0.46
Hdac4Q6NZM9 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.95■□□□□ 0.46
Hdac4Q6NZM9 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hdac4Q6NZM9 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hdac4Q6NZM9 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hdac4Q6NZM9 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Hdac4Q6NZM9 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hdac4Q6NZM9 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hdac4Q6NZM9 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hdac4Q6NZM9 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hdac4Q6NZM9 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hdac4Q6NZM9 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Hdac4Q6NZM9 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hdac4Q6NZM9 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hdac4Q6NZM9 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hdac4Q6NZM9 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hdac4Q6NZM9 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.94■□□□□ 0.46
Hdac4Q6NZM9 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hdac4Q6NZM9 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Hdac4Q6NZM9 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.94■□□□□ 0.46
Hdac4Q6NZM9 Olfr129-201ENSMUST00000122318 993 ntBASIC17.94■□□□□ 0.46
Hdac4Q6NZM9 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Hdac4Q6NZM9 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
Hdac4Q6NZM9 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.94■□□□□ 0.46
Hdac4Q6NZM9 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hdac4Q6NZM9 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Hdac4Q6NZM9 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.94■□□□□ 0.46
Hdac4Q6NZM9 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hdac4Q6NZM9 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hdac4Q6NZM9 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Hdac4Q6NZM9 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hdac4Q6NZM9 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hdac4Q6NZM9 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hdac4Q6NZM9 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Hdac4Q6NZM9 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hdac4Q6NZM9 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Hdac4Q6NZM9 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hdac4Q6NZM9 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Hdac4Q6NZM9 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hdac4Q6NZM9 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hdac4Q6NZM9 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hdac4Q6NZM9 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hdac4Q6NZM9 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.93■□□□□ 0.46
Hdac4Q6NZM9 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Hdac4Q6NZM9 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Hdac4Q6NZM9 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Hdac4Q6NZM9 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.93■□□□□ 0.46
Hdac4Q6NZM9 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hdac4Q6NZM9 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Hdac4Q6NZM9 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Hdac4Q6NZM9 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Hdac4Q6NZM9 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hdac4Q6NZM9 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hdac4Q6NZM9 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hdac4Q6NZM9 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Hdac4Q6NZM9 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Hdac4Q6NZM9 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hdac4Q6NZM9 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.93■□□□□ 0.46
Hdac4Q6NZM9 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hdac4Q6NZM9 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hdac4Q6NZM9 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hdac4Q6NZM9 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hdac4Q6NZM9 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hdac4Q6NZM9 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hdac4Q6NZM9 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hdac4Q6NZM9 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hdac4Q6NZM9 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hdac4Q6NZM9 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hdac4Q6NZM9 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hdac4Q6NZM9 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hdac4Q6NZM9 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Hdac4Q6NZM9 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hdac4Q6NZM9 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hdac4Q6NZM9 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hdac4Q6NZM9 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hdac4Q6NZM9 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hdac4Q6NZM9 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.92■□□□□ 0.46
Hdac4Q6NZM9 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms