Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sp140Q6NSQ5 Gm7729-201ENSMUST00000050143 801 ntBASIC16.31■□□□□ 0.2
Sp140Q6NSQ5 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sp140Q6NSQ5 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sp140Q6NSQ5 App-207ENSMUST00000227737 2827 ntBASIC16.31■□□□□ 0.2
Sp140Q6NSQ5 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sp140Q6NSQ5 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.31■□□□□ 0.2
Sp140Q6NSQ5 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sp140Q6NSQ5 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sp140Q6NSQ5 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.3■□□□□ 0.2
Sp140Q6NSQ5 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sp140Q6NSQ5 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sp140Q6NSQ5 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sp140Q6NSQ5 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Sp140Q6NSQ5 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sp140Q6NSQ5 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sp140Q6NSQ5 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Sp140Q6NSQ5 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sp140Q6NSQ5 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sp140Q6NSQ5 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Sp140Q6NSQ5 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Sp140Q6NSQ5 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sp140Q6NSQ5 Gm9013-201ENSMUST00000132939 882 ntBASIC16.3■□□□□ 0.2
Sp140Q6NSQ5 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sp140Q6NSQ5 Mir7071-201ENSMUST00000184847 69 ntBASIC16.3■□□□□ 0.2
Sp140Q6NSQ5 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sp140Q6NSQ5 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.3■□□□□ 0.2
Sp140Q6NSQ5 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Sp140Q6NSQ5 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sp140Q6NSQ5 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sp140Q6NSQ5 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sp140Q6NSQ5 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sp140Q6NSQ5 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sp140Q6NSQ5 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sp140Q6NSQ5 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.3■□□□□ 0.2
Sp140Q6NSQ5 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Sp140Q6NSQ5 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Sp140Q6NSQ5 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.3■□□□□ 0.2
Sp140Q6NSQ5 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Sp140Q6NSQ5 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sp140Q6NSQ5 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sp140Q6NSQ5 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sp140Q6NSQ5 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sp140Q6NSQ5 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sp140Q6NSQ5 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sp140Q6NSQ5 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Sp140Q6NSQ5 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Sp140Q6NSQ5 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Sp140Q6NSQ5 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sp140Q6NSQ5 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sp140Q6NSQ5 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sp140Q6NSQ5 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Sp140Q6NSQ5 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Sp140Q6NSQ5 Gm5587-201ENSMUST00000206270 674 ntBASIC16.29■□□□□ 0.2
Sp140Q6NSQ5 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sp140Q6NSQ5 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Sp140Q6NSQ5 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sp140Q6NSQ5 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sp140Q6NSQ5 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sp140Q6NSQ5 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sp140Q6NSQ5 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Sp140Q6NSQ5 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sp140Q6NSQ5 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.28■□□□□ 0.2
Sp140Q6NSQ5 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sp140Q6NSQ5 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sp140Q6NSQ5 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.28■□□□□ 0.2
Sp140Q6NSQ5 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sp140Q6NSQ5 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sp140Q6NSQ5 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sp140Q6NSQ5 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.28■□□□□ 0.2
Sp140Q6NSQ5 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.28■□□□□ 0.2
Sp140Q6NSQ5 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Sp140Q6NSQ5 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sp140Q6NSQ5 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sp140Q6NSQ5 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sp140Q6NSQ5 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sp140Q6NSQ5 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sp140Q6NSQ5 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sp140Q6NSQ5 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sp140Q6NSQ5 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.28■□□□□ 0.2
Sp140Q6NSQ5 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sp140Q6NSQ5 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sp140Q6NSQ5 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sp140Q6NSQ5 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sp140Q6NSQ5 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sp140Q6NSQ5 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sp140Q6NSQ5 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sp140Q6NSQ5 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Sp140Q6NSQ5 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sp140Q6NSQ5 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sp140Q6NSQ5 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sp140Q6NSQ5 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Sp140Q6NSQ5 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.27■□□□□ 0.19
Sp140Q6NSQ5 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sp140Q6NSQ5 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Sp140Q6NSQ5 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sp140Q6NSQ5 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sp140Q6NSQ5 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Sp140Q6NSQ5 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
Sp140Q6NSQ5 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms