Protein–RNA interactions for Protein: Q6DID3

Scaf8, Protein SCAF8, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf8Q6DID3 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Scaf8Q6DID3 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Scaf8Q6DID3 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Scaf8Q6DID3 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scaf8Q6DID3 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.67■□□□□ 0.58
Scaf8Q6DID3 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scaf8Q6DID3 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Scaf8Q6DID3 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scaf8Q6DID3 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scaf8Q6DID3 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Scaf8Q6DID3 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Scaf8Q6DID3 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Scaf8Q6DID3 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Scaf8Q6DID3 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scaf8Q6DID3 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scaf8Q6DID3 Gm43474-201ENSMUST00000196415 774 ntBASIC18.66■□□□□ 0.58
Scaf8Q6DID3 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scaf8Q6DID3 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scaf8Q6DID3 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scaf8Q6DID3 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scaf8Q6DID3 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scaf8Q6DID3 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scaf8Q6DID3 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scaf8Q6DID3 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scaf8Q6DID3 Nrn1-204ENSMUST00000224323 1779 ntBASIC18.65■□□□□ 0.58
Scaf8Q6DID3 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Scaf8Q6DID3 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
Scaf8Q6DID3 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scaf8Q6DID3 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scaf8Q6DID3 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC18.65■□□□□ 0.58
Scaf8Q6DID3 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Scaf8Q6DID3 Gm15427-201ENSMUST00000117288 531 ntBASIC18.65■□□□□ 0.58
Scaf8Q6DID3 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC18.65■□□□□ 0.58
Scaf8Q6DID3 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC18.65■□□□□ 0.58
Scaf8Q6DID3 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Scaf8Q6DID3 Gm5177-201ENSMUST00000183092 997 ntBASIC18.65■□□□□ 0.58
Scaf8Q6DID3 Gm9682-201ENSMUST00000197505 556 ntBASIC18.65■□□□□ 0.58
Scaf8Q6DID3 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scaf8Q6DID3 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scaf8Q6DID3 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scaf8Q6DID3 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scaf8Q6DID3 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Scaf8Q6DID3 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Scaf8Q6DID3 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scaf8Q6DID3 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scaf8Q6DID3 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scaf8Q6DID3 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scaf8Q6DID3 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Scaf8Q6DID3 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Scaf8Q6DID3 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Scaf8Q6DID3 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Scaf8Q6DID3 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scaf8Q6DID3 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scaf8Q6DID3 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Scaf8Q6DID3 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scaf8Q6DID3 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scaf8Q6DID3 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scaf8Q6DID3 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC18.64■□□□□ 0.57
Scaf8Q6DID3 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Scaf8Q6DID3 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scaf8Q6DID3 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC18.64■□□□□ 0.57
Scaf8Q6DID3 Gm7787-201ENSMUST00000216858 688 ntBASIC18.64■□□□□ 0.57
Scaf8Q6DID3 AC131187.1-201ENSMUST00000224567 809 ntBASIC18.64■□□□□ 0.57
Scaf8Q6DID3 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scaf8Q6DID3 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scaf8Q6DID3 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scaf8Q6DID3 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scaf8Q6DID3 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scaf8Q6DID3 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Scaf8Q6DID3 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Scaf8Q6DID3 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scaf8Q6DID3 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scaf8Q6DID3 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scaf8Q6DID3 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scaf8Q6DID3 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scaf8Q6DID3 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC18.63■□□□□ 0.57
Scaf8Q6DID3 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC18.63■□□□□ 0.57
Scaf8Q6DID3 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC18.63■□□□□ 0.57
Scaf8Q6DID3 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC18.63■□□□□ 0.57
Scaf8Q6DID3 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC18.63■□□□□ 0.57
Scaf8Q6DID3 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Scaf8Q6DID3 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Scaf8Q6DID3 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scaf8Q6DID3 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC18.63■□□□□ 0.57
Scaf8Q6DID3 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Scaf8Q6DID3 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scaf8Q6DID3 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scaf8Q6DID3 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC18.63■□□□□ 0.57
Scaf8Q6DID3 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Scaf8Q6DID3 Gm38318-201ENSMUST00000195769 1706 ntBASIC18.63■□□□□ 0.57
Scaf8Q6DID3 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scaf8Q6DID3 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Scaf8Q6DID3 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scaf8Q6DID3 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Scaf8Q6DID3 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scaf8Q6DID3 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scaf8Q6DID3 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scaf8Q6DID3 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scaf8Q6DID3 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scaf8Q6DID3 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms