Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhga7Q6DD96 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhga7Q6DD96 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.6■□□□□ 0.09
Pcdhga7Q6DD96 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Pcdhga7Q6DD96 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhga7Q6DD96 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.6■□□□□ 0.09
Pcdhga7Q6DD96 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Pcdhga7Q6DD96 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhga7Q6DD96 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Pcdhga7Q6DD96 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhga7Q6DD96 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Pcdhga7Q6DD96 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhga7Q6DD96 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhga7Q6DD96 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhga7Q6DD96 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.59■□□□□ 0.09
Pcdhga7Q6DD96 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga7Q6DD96 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Pcdhga7Q6DD96 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga7Q6DD96 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga7Q6DD96 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga7Q6DD96 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga7Q6DD96 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga7Q6DD96 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga7Q6DD96 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga7Q6DD96 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga7Q6DD96 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga7Q6DD96 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga7Q6DD96 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.59■□□□□ 0.09
Pcdhga7Q6DD96 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga7Q6DD96 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga7Q6DD96 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga7Q6DD96 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga7Q6DD96 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga7Q6DD96 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
Pcdhga7Q6DD96 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga7Q6DD96 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga7Q6DD96 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga7Q6DD96 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga7Q6DD96 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga7Q6DD96 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.59■□□□□ 0.09
Pcdhga7Q6DD96 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Pcdhga7Q6DD96 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga7Q6DD96 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhga7Q6DD96 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Pcdhga7Q6DD96 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhga7Q6DD96 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhga7Q6DD96 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.09
Pcdhga7Q6DD96 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhga7Q6DD96 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhga7Q6DD96 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.58■□□□□ 0.08
Pcdhga7Q6DD96 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Pcdhga7Q6DD96 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC15.58■□□□□ 0.08
Pcdhga7Q6DD96 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhga7Q6DD96 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhga7Q6DD96 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.58■□□□□ 0.08
Pcdhga7Q6DD96 Gm18959-201ENSMUST00000208954 655 ntBASIC15.58■□□□□ 0.08
Pcdhga7Q6DD96 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.58■□□□□ 0.08
Pcdhga7Q6DD96 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhga7Q6DD96 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhga7Q6DD96 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Pcdhga7Q6DD96 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.58■□□□□ 0.08
Pcdhga7Q6DD96 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhga7Q6DD96 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhga7Q6DD96 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Pcdhga7Q6DD96 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhga7Q6DD96 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.57■□□□□ 0.08
Pcdhga7Q6DD96 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.57■□□□□ 0.08
Pcdhga7Q6DD96 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga7Q6DD96 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.57■□□□□ 0.08
Pcdhga7Q6DD96 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Pcdhga7Q6DD96 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Pcdhga7Q6DD96 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.57■□□□□ 0.08
Pcdhga7Q6DD96 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC15.57■□□□□ 0.08
Pcdhga7Q6DD96 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC15.57■□□□□ 0.08
Pcdhga7Q6DD96 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Pcdhga7Q6DD96 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga7Q6DD96 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga7Q6DD96 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.57■□□□□ 0.08
Pcdhga7Q6DD96 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.57■□□□□ 0.08
Pcdhga7Q6DD96 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga7Q6DD96 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga7Q6DD96 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga7Q6DD96 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
Pcdhga7Q6DD96 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.57■□□□□ 0.08
Pcdhga7Q6DD96 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.57■□□□□ 0.08
Pcdhga7Q6DD96 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga7Q6DD96 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga7Q6DD96 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga7Q6DD96 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga7Q6DD96 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga7Q6DD96 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga7Q6DD96 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga7Q6DD96 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga7Q6DD96 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga7Q6DD96 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga7Q6DD96 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga7Q6DD96 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga7Q6DD96 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga7Q6DD96 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga7Q6DD96 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms