Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Zfp248Q640N4 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Zfp248Q640N4 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Zfp248Q640N4 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Zfp248Q640N4 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Zfp248Q640N4 Gm27389-201ENSMUST00000183622 195 ntBASIC12.23□□□□□ -0.45
Zfp248Q640N4 Gm43799-201ENSMUST00000201845 579 ntBASIC12.23□□□□□ -0.45
Zfp248Q640N4 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Zfp248Q640N4 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Zfp248Q640N4 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Zfp248Q640N4 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Zfp248Q640N4 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC12.23□□□□□ -0.45
Zfp248Q640N4 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Zfp248Q640N4 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Zfp248Q640N4 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Zfp248Q640N4 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Zfp248Q640N4 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC12.23□□□□□ -0.45
Zfp248Q640N4 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Zfp248Q640N4 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC12.23□□□□□ -0.45
Zfp248Q640N4 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Zfp248Q640N4 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Zfp248Q640N4 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Zfp248Q640N4 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Zfp248Q640N4 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Zfp248Q640N4 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC12.23□□□□□ -0.45
Zfp248Q640N4 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Zfp248Q640N4 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Zfp248Q640N4 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Zfp248Q640N4 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC12.22□□□□□ -0.45
Zfp248Q640N4 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Zfp248Q640N4 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Zfp248Q640N4 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Zfp248Q640N4 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Zfp248Q640N4 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Zfp248Q640N4 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Zfp248Q640N4 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Zfp248Q640N4 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Zfp248Q640N4 Gm32996-201ENSMUST00000199828 1447 ntBASIC12.22□□□□□ -0.45
Zfp248Q640N4 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Zfp248Q640N4 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Zfp248Q640N4 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Zfp248Q640N4 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC12.22□□□□□ -0.45
Zfp248Q640N4 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC12.22□□□□□ -0.45
Zfp248Q640N4 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Zfp248Q640N4 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC12.22□□□□□ -0.45
Zfp248Q640N4 AC134329.2-201ENSMUST00000217897 428 ntBASIC12.22□□□□□ -0.45
Zfp248Q640N4 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC12.22□□□□□ -0.45
Zfp248Q640N4 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC12.22□□□□□ -0.45
Zfp248Q640N4 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Zfp248Q640N4 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Zfp248Q640N4 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Zfp248Q640N4 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Zfp248Q640N4 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Zfp248Q640N4 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Zfp248Q640N4 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC12.22□□□□□ -0.45
Zfp248Q640N4 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Zfp248Q640N4 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Zfp248Q640N4 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Zfp248Q640N4 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Zfp248Q640N4 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Zfp248Q640N4 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Zfp248Q640N4 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Zfp248Q640N4 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Zfp248Q640N4 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Zfp248Q640N4 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Zfp248Q640N4 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Zfp248Q640N4 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Zfp248Q640N4 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Zfp248Q640N4 Gm15442-201ENSMUST00000117905 1527 ntBASIC12.21□□□□□ -0.45
Zfp248Q640N4 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
Zfp248Q640N4 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Zfp248Q640N4 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Zfp248Q640N4 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Zfp248Q640N4 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Zfp248Q640N4 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.21□□□□□ -0.45
Zfp248Q640N4 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Zfp248Q640N4 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Zfp248Q640N4 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Zfp248Q640N4 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Zfp248Q640N4 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Zfp248Q640N4 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Zfp248Q640N4 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Zfp248Q640N4 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Zfp248Q640N4 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC12.21□□□□□ -0.45
Zfp248Q640N4 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC12.21□□□□□ -0.45
Zfp248Q640N4 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.21□□□□□ -0.45
Zfp248Q640N4 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Zfp248Q640N4 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Zfp248Q640N4 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Zfp248Q640N4 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Zfp248Q640N4 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Zfp248Q640N4 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Zfp248Q640N4 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Zfp248Q640N4 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC12.21□□□□□ -0.46
Zfp248Q640N4 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC12.21□□□□□ -0.46
Zfp248Q640N4 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Zfp248Q640N4 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Zfp248Q640N4 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Zfp248Q640N4 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Zfp248Q640N4 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms