Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Six3Q62233 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Six3Q62233 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Six3Q62233 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Six3Q62233 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Six3Q62233 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Six3Q62233 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Six3Q62233 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Six3Q62233 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Six3Q62233 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.71■□□□□ 0.1
Six3Q62233 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Six3Q62233 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.1
Six3Q62233 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Six3Q62233 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six3Q62233 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six3Q62233 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six3Q62233 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Six3Q62233 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six3Q62233 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six3Q62233 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Six3Q62233 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Six3Q62233 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six3Q62233 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Six3Q62233 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Six3Q62233 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.7■□□□□ 0.1
Six3Q62233 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six3Q62233 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six3Q62233 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Six3Q62233 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.7■□□□□ 0.1
Six3Q62233 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six3Q62233 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six3Q62233 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six3Q62233 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six3Q62233 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six3Q62233 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six3Q62233 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.7■□□□□ 0.1
Six3Q62233 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six3Q62233 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six3Q62233 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six3Q62233 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six3Q62233 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Six3Q62233 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six3Q62233 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six3Q62233 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six3Q62233 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six3Q62233 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Six3Q62233 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.69■□□□□ 0.1
Six3Q62233 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
Six3Q62233 Krtap5-1-202ENSMUST00000188274 742 ntBASIC15.69■□□□□ 0.1
Six3Q62233 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Six3Q62233 Gm18101-201ENSMUST00000215769 548 ntBASIC15.69■□□□□ 0.1
Six3Q62233 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six3Q62233 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six3Q62233 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Six3Q62233 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Six3Q62233 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Six3Q62233 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Six3Q62233 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six3Q62233 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Six3Q62233 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six3Q62233 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Six3Q62233 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six3Q62233 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Six3Q62233 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Six3Q62233 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six3Q62233 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six3Q62233 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six3Q62233 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.68■□□□□ 0.1
Six3Q62233 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Six3Q62233 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six3Q62233 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Six3Q62233 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Six3Q62233 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six3Q62233 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Six3Q62233 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six3Q62233 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six3Q62233 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six3Q62233 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.68■□□□□ 0.1
Six3Q62233 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six3Q62233 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six3Q62233 Gm11355-201ENSMUST00000121120 306 ntBASIC15.68■□□□□ 0.1
Six3Q62233 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six3Q62233 Gm18032-201ENSMUST00000222541 538 ntBASIC15.68■□□□□ 0.1
Six3Q62233 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six3Q62233 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six3Q62233 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six3Q62233 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six3Q62233 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six3Q62233 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six3Q62233 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six3Q62233 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six3Q62233 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Six3Q62233 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Six3Q62233 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Six3Q62233 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six3Q62233 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six3Q62233 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six3Q62233 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six3Q62233 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Six3Q62233 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms