Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Six1Q62231 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Six1Q62231 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six1Q62231 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Six1Q62231 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six1Q62231 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six1Q62231 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six1Q62231 Gm10052-201ENSMUST00000168019 960 ntBASIC16.46■□□□□ 0.23
Six1Q62231 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.46■□□□□ 0.23
Six1Q62231 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six1Q62231 Gm7729-201ENSMUST00000050143 801 ntBASIC16.46■□□□□ 0.23
Six1Q62231 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six1Q62231 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six1Q62231 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six1Q62231 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six1Q62231 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six1Q62231 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six1Q62231 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six1Q62231 BC037039-201ENSMUST00000192003 2205 ntBASIC16.46■□□□□ 0.23
Six1Q62231 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six1Q62231 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
Six1Q62231 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
Six1Q62231 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six1Q62231 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
Six1Q62231 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Six1Q62231 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Six1Q62231 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Six1Q62231 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six1Q62231 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six1Q62231 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six1Q62231 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
Six1Q62231 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six1Q62231 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.45■□□□□ 0.22
Six1Q62231 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six1Q62231 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.45■□□□□ 0.22
Six1Q62231 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Six1Q62231 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six1Q62231 Gm11355-201ENSMUST00000121120 306 ntBASIC16.45■□□□□ 0.22
Six1Q62231 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six1Q62231 Gm18032-201ENSMUST00000222541 538 ntBASIC16.45■□□□□ 0.22
Six1Q62231 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six1Q62231 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six1Q62231 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six1Q62231 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six1Q62231 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Six1Q62231 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.45■□□□□ 0.22
Six1Q62231 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six1Q62231 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Six1Q62231 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Six1Q62231 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Six1Q62231 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six1Q62231 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six1Q62231 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six1Q62231 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six1Q62231 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Six1Q62231 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six1Q62231 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six1Q62231 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.44■□□□□ 0.22
Six1Q62231 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.44■□□□□ 0.22
Six1Q62231 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Six1Q62231 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Six1Q62231 Gm22697-201ENSMUST00000175194 63 ntBASIC16.44■□□□□ 0.22
Six1Q62231 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Six1Q62231 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.44■□□□□ 0.22
Six1Q62231 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Six1Q62231 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six1Q62231 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six1Q62231 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six1Q62231 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.44■□□□□ 0.22
Six1Q62231 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Six1Q62231 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six1Q62231 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Six1Q62231 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Six1Q62231 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Six1Q62231 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Six1Q62231 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Six1Q62231 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Six1Q62231 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Six1Q62231 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Six1Q62231 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Six1Q62231 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Six1Q62231 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Six1Q62231 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.43■□□□□ 0.22
Six1Q62231 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.43■□□□□ 0.22
Six1Q62231 Mir6404-201ENSMUST00000183699 94 ntBASIC16.43■□□□□ 0.22
Six1Q62231 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.43■□□□□ 0.22
Six1Q62231 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.43■□□□□ 0.22
Six1Q62231 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Six1Q62231 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Six1Q62231 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Six1Q62231 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.43■□□□□ 0.22
Six1Q62231 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Six1Q62231 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Six1Q62231 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Six1Q62231 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Six1Q62231 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Six1Q62231 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Six1Q62231 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Six1Q62231 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Six1Q62231 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms