Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ctr9Q62018 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Ctr9Q62018 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ctr9Q62018 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Ctr9Q62018 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.87■□□□□ 0.61
Ctr9Q62018 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18.87■□□□□ 0.61
Ctr9Q62018 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.87■□□□□ 0.61
Ctr9Q62018 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ctr9Q62018 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ctr9Q62018 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ctr9Q62018 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Ctr9Q62018 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ctr9Q62018 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Ctr9Q62018 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ctr9Q62018 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Ctr9Q62018 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ctr9Q62018 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC18.86■□□□□ 0.61
Ctr9Q62018 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
Ctr9Q62018 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ctr9Q62018 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Ctr9Q62018 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Ctr9Q62018 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ctr9Q62018 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ctr9Q62018 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
Ctr9Q62018 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Ctr9Q62018 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ctr9Q62018 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ctr9Q62018 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ctr9Q62018 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Ctr9Q62018 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ctr9Q62018 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
Ctr9Q62018 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ctr9Q62018 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC18.86■□□□□ 0.61
Ctr9Q62018 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.86■□□□□ 0.61
Ctr9Q62018 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ctr9Q62018 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ctr9Q62018 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ctr9Q62018 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ctr9Q62018 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ctr9Q62018 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Ctr9Q62018 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ctr9Q62018 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ctr9Q62018 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ctr9Q62018 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ctr9Q62018 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ctr9Q62018 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ctr9Q62018 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ctr9Q62018 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Ctr9Q62018 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.85■□□□□ 0.61
Ctr9Q62018 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC18.85■□□□□ 0.61
Ctr9Q62018 Gm6376-201ENSMUST00000209407 580 ntBASIC18.85■□□□□ 0.61
Ctr9Q62018 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.85■□□□□ 0.61
Ctr9Q62018 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ctr9Q62018 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ctr9Q62018 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ctr9Q62018 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ctr9Q62018 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ctr9Q62018 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ctr9Q62018 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ctr9Q62018 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ctr9Q62018 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Ctr9Q62018 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ctr9Q62018 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC18.84■□□□□ 0.61
Ctr9Q62018 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ctr9Q62018 Gm4459-201ENSMUST00000118750 468 ntBASIC18.84■□□□□ 0.61
Ctr9Q62018 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ctr9Q62018 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ctr9Q62018 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ctr9Q62018 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Ctr9Q62018 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ctr9Q62018 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ctr9Q62018 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ctr9Q62018 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ctr9Q62018 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ctr9Q62018 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.84■□□□□ 0.61
Ctr9Q62018 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.84■□□□□ 0.61
Ctr9Q62018 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ctr9Q62018 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ctr9Q62018 Gm7862-201ENSMUST00000121461 292 ntBASIC18.83■□□□□ 0.6
Ctr9Q62018 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Ctr9Q62018 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
Ctr9Q62018 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.6
Ctr9Q62018 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.83■□□□□ 0.6
Ctr9Q62018 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.6
Ctr9Q62018 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ctr9Q62018 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ctr9Q62018 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ctr9Q62018 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ctr9Q62018 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ctr9Q62018 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ctr9Q62018 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ctr9Q62018 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ctr9Q62018 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.6
Ctr9Q62018 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Ctr9Q62018 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ctr9Q62018 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ctr9Q62018 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ctr9Q62018 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ctr9Q62018 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ctr9Q62018 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms