Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Notch3Q61982 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Notch3Q61982 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Notch3Q61982 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Notch3Q61982 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC12.32□□□□□ -0.44
Notch3Q61982 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC12.32□□□□□ -0.44
Notch3Q61982 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Notch3Q61982 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Notch3Q61982 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Notch3Q61982 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Notch3Q61982 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Notch3Q61982 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Notch3Q61982 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Notch3Q61982 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Notch3Q61982 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Notch3Q61982 Gm1818-201ENSMUST00000169406 1184 ntBASIC12.32□□□□□ -0.44
Notch3Q61982 Cmtm5-203ENSMUST00000227441 610 ntBASIC12.32□□□□□ -0.44
Notch3Q61982 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Notch3Q61982 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Notch3Q61982 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Notch3Q61982 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Notch3Q61982 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Notch3Q61982 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Notch3Q61982 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Notch3Q61982 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Notch3Q61982 Gm43338-201ENSMUST00000198617 2223 ntBASIC12.32□□□□□ -0.44
Notch3Q61982 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Notch3Q61982 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Notch3Q61982 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Notch3Q61982 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Notch3Q61982 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Notch3Q61982 Zfp264-201ENSMUST00000208656 1563 ntBASIC12.31□□□□□ -0.44
Notch3Q61982 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Notch3Q61982 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Notch3Q61982 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Notch3Q61982 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Notch3Q61982 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC12.31□□□□□ -0.44
Notch3Q61982 Gm44430-201ENSMUST00000203376 995 ntBASIC12.31□□□□□ -0.44
Notch3Q61982 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Notch3Q61982 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Notch3Q61982 Gm32996-201ENSMUST00000199828 1447 ntBASIC12.31□□□□□ -0.44
Notch3Q61982 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Notch3Q61982 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Notch3Q61982 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Notch3Q61982 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Notch3Q61982 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.31□□□□□ -0.44
Notch3Q61982 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Notch3Q61982 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Notch3Q61982 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Notch3Q61982 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Notch3Q61982 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Notch3Q61982 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Notch3Q61982 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Notch3Q61982 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Notch3Q61982 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Notch3Q61982 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Notch3Q61982 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Notch3Q61982 Gm15467-201ENSMUST00000120582 445 ntBASIC12.31□□□□□ -0.44
Notch3Q61982 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Notch3Q61982 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Notch3Q61982 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Notch3Q61982 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Notch3Q61982 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Notch3Q61982 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Notch3Q61982 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC12.31□□□□□ -0.44
Notch3Q61982 Gm10060-201ENSMUST00000212002 111 ntBASIC12.31□□□□□ -0.44
Notch3Q61982 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Notch3Q61982 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Notch3Q61982 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Notch3Q61982 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Notch3Q61982 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Notch3Q61982 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Notch3Q61982 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Notch3Q61982 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Notch3Q61982 Gm15635-204ENSMUST00000208024 2539 ntBASIC12.3□□□□□ -0.44
Notch3Q61982 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Notch3Q61982 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Notch3Q61982 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Notch3Q61982 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Notch3Q61982 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Notch3Q61982 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Notch3Q61982 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC12.3□□□□□ -0.44
Notch3Q61982 Gm27702-201ENSMUST00000184512 56 ntBASIC12.3□□□□□ -0.44
Notch3Q61982 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Notch3Q61982 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.3□□□□□ -0.44
Notch3Q61982 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Notch3Q61982 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Notch3Q61982 AL590614.2-201ENSMUST00000225374 1937 ntBASIC12.3□□□□□ -0.44
Notch3Q61982 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.3□□□□□ -0.44
Notch3Q61982 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Notch3Q61982 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Notch3Q61982 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Notch3Q61982 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Notch3Q61982 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Notch3Q61982 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Notch3Q61982 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Notch3Q61982 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Notch3Q61982 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC12.29□□□□□ -0.44
Notch3Q61982 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Notch3Q61982 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms