Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sdf4Q61112 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sdf4Q61112 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sdf4Q61112 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sdf4Q61112 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sdf4Q61112 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sdf4Q61112 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sdf4Q61112 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.28■□□□□ 0.2
Sdf4Q61112 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sdf4Q61112 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sdf4Q61112 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sdf4Q61112 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Sdf4Q61112 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Sdf4Q61112 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sdf4Q61112 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sdf4Q61112 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sdf4Q61112 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sdf4Q61112 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.28■□□□□ 0.2
Sdf4Q61112 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Sdf4Q61112 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sdf4Q61112 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.28■□□□□ 0.2
Sdf4Q61112 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.28■□□□□ 0.2
Sdf4Q61112 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Sdf4Q61112 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Sdf4Q61112 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Sdf4Q61112 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sdf4Q61112 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sdf4Q61112 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Sdf4Q61112 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Sdf4Q61112 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sdf4Q61112 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sdf4Q61112 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sdf4Q61112 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sdf4Q61112 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sdf4Q61112 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sdf4Q61112 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
Sdf4Q61112 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sdf4Q61112 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Sdf4Q61112 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Sdf4Q61112 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Sdf4Q61112 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.27■□□□□ 0.2
Sdf4Q61112 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sdf4Q61112 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sdf4Q61112 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.27■□□□□ 0.2
Sdf4Q61112 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Sdf4Q61112 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Sdf4Q61112 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sdf4Q61112 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sdf4Q61112 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sdf4Q61112 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sdf4Q61112 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sdf4Q61112 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Sdf4Q61112 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Sdf4Q61112 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Sdf4Q61112 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sdf4Q61112 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.27■□□□□ 0.2
Sdf4Q61112 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sdf4Q61112 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Sdf4Q61112 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sdf4Q61112 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sdf4Q61112 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Sdf4Q61112 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.27■□□□□ 0.19
Sdf4Q61112 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sdf4Q61112 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Sdf4Q61112 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.27■□□□□ 0.19
Sdf4Q61112 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.27■□□□□ 0.19
Sdf4Q61112 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Sdf4Q61112 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sdf4Q61112 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sdf4Q61112 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.27■□□□□ 0.19
Sdf4Q61112 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sdf4Q61112 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sdf4Q61112 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sdf4Q61112 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sdf4Q61112 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sdf4Q61112 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sdf4Q61112 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sdf4Q61112 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sdf4Q61112 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Sdf4Q61112 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sdf4Q61112 Gm13312-201ENSMUST00000119631 718 ntBASIC16.26■□□□□ 0.19
Sdf4Q61112 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.26■□□□□ 0.19
Sdf4Q61112 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Sdf4Q61112 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Sdf4Q61112 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.26■□□□□ 0.19
Sdf4Q61112 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.26■□□□□ 0.19
Sdf4Q61112 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sdf4Q61112 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sdf4Q61112 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sdf4Q61112 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sdf4Q61112 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sdf4Q61112 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Sdf4Q61112 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Sdf4Q61112 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sdf4Q61112 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
Sdf4Q61112 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Sdf4Q61112 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sdf4Q61112 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.25■□□□□ 0.19
Sdf4Q61112 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sdf4Q61112 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms