Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Xrcc1Q60596 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Xrcc1Q60596 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Xrcc1Q60596 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.33■□□□□ 0.04
Xrcc1Q60596 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.33■□□□□ 0.04
Xrcc1Q60596 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.33■□□□□ 0.04
Xrcc1Q60596 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Xrcc1Q60596 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Xrcc1Q60596 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.33■□□□□ 0.04
Xrcc1Q60596 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Xrcc1Q60596 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
Xrcc1Q60596 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Xrcc1Q60596 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Xrcc1Q60596 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Xrcc1Q60596 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Xrcc1Q60596 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Xrcc1Q60596 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Xrcc1Q60596 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Xrcc1Q60596 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Xrcc1Q60596 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Xrcc1Q60596 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Xrcc1Q60596 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Xrcc1Q60596 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Xrcc1Q60596 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Xrcc1Q60596 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Xrcc1Q60596 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Xrcc1Q60596 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Xrcc1Q60596 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.32■□□□□ 0.04
Xrcc1Q60596 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Xrcc1Q60596 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Xrcc1Q60596 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.32■□□□□ 0.04
Xrcc1Q60596 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Xrcc1Q60596 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.32■□□□□ 0.04
Xrcc1Q60596 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Xrcc1Q60596 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.32■□□□□ 0.04
Xrcc1Q60596 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.32■□□□□ 0.04
Xrcc1Q60596 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Xrcc1Q60596 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.32■□□□□ 0.04
Xrcc1Q60596 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Xrcc1Q60596 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.32■□□□□ 0.04
Xrcc1Q60596 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Xrcc1Q60596 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.32■□□□□ 0.04
Xrcc1Q60596 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Xrcc1Q60596 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
Xrcc1Q60596 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Xrcc1Q60596 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Xrcc1Q60596 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Xrcc1Q60596 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Xrcc1Q60596 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Xrcc1Q60596 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Xrcc1Q60596 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Xrcc1Q60596 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Xrcc1Q60596 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Xrcc1Q60596 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Xrcc1Q60596 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Xrcc1Q60596 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Xrcc1Q60596 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Xrcc1Q60596 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.31■□□□□ 0.04
Xrcc1Q60596 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Xrcc1Q60596 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.31■□□□□ 0.04
Xrcc1Q60596 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Xrcc1Q60596 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Xrcc1Q60596 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Xrcc1Q60596 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Xrcc1Q60596 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Xrcc1Q60596 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Xrcc1Q60596 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Xrcc1Q60596 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Xrcc1Q60596 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Xrcc1Q60596 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Xrcc1Q60596 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Xrcc1Q60596 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Xrcc1Q60596 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Xrcc1Q60596 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Xrcc1Q60596 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Xrcc1Q60596 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Xrcc1Q60596 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Xrcc1Q60596 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Xrcc1Q60596 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Xrcc1Q60596 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Xrcc1Q60596 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Xrcc1Q60596 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Xrcc1Q60596 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Xrcc1Q60596 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.3■□□□□ 0.04
Xrcc1Q60596 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Xrcc1Q60596 Gm15165-201ENSMUST00000118140 502 ntBASIC15.3■□□□□ 0.04
Xrcc1Q60596 Gm27867-201ENSMUST00000184778 125 ntBASIC15.3■□□□□ 0.04
Xrcc1Q60596 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Xrcc1Q60596 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Xrcc1Q60596 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Xrcc1Q60596 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Xrcc1Q60596 Birc2-201ENSMUST00000054878 378 ntBASIC15.3■□□□□ 0.04
Xrcc1Q60596 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Xrcc1Q60596 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Xrcc1Q60596 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Xrcc1Q60596 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Xrcc1Q60596 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Xrcc1Q60596 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Xrcc1Q60596 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Xrcc1Q60596 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms