Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.05■□□□□ 0.32
Shroom1Q5SX79 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Shroom1Q5SX79 Gm5712-201ENSMUST00000199748 1043 ntBASIC17.05■□□□□ 0.32
Shroom1Q5SX79 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.05■□□□□ 0.32
Shroom1Q5SX79 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Shroom1Q5SX79 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Shroom1Q5SX79 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Shroom1Q5SX79 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shroom1Q5SX79 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shroom1Q5SX79 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shroom1Q5SX79 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Shroom1Q5SX79 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shroom1Q5SX79 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shroom1Q5SX79 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Shroom1Q5SX79 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shroom1Q5SX79 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
Shroom1Q5SX79 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.05■□□□□ 0.32
Shroom1Q5SX79 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shroom1Q5SX79 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shroom1Q5SX79 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shroom1Q5SX79 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Shroom1Q5SX79 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Shroom1Q5SX79 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shroom1Q5SX79 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shroom1Q5SX79 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shroom1Q5SX79 Mir5131-201ENSMUST00000175426 93 ntBASIC17.04■□□□□ 0.32
Shroom1Q5SX79 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.04■□□□□ 0.32
Shroom1Q5SX79 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.04■□□□□ 0.32
Shroom1Q5SX79 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Shroom1Q5SX79 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shroom1Q5SX79 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shroom1Q5SX79 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shroom1Q5SX79 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shroom1Q5SX79 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shroom1Q5SX79 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shroom1Q5SX79 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Shroom1Q5SX79 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shroom1Q5SX79 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.03■□□□□ 0.32
Shroom1Q5SX79 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Shroom1Q5SX79 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Shroom1Q5SX79 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shroom1Q5SX79 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shroom1Q5SX79 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Shroom1Q5SX79 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shroom1Q5SX79 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shroom1Q5SX79 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.03■□□□□ 0.32
Shroom1Q5SX79 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shroom1Q5SX79 Gm1401-201ENSMUST00000122048 772 ntBASIC17.03■□□□□ 0.32
Shroom1Q5SX79 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Shroom1Q5SX79 Gm36967-201ENSMUST00000193814 266 ntBASIC17.03■□□□□ 0.32
Shroom1Q5SX79 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.03■□□□□ 0.32
Shroom1Q5SX79 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Shroom1Q5SX79 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Shroom1Q5SX79 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shroom1Q5SX79 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Shroom1Q5SX79 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shroom1Q5SX79 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shroom1Q5SX79 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shroom1Q5SX79 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Shroom1Q5SX79 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shroom1Q5SX79 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Shroom1Q5SX79 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shroom1Q5SX79 Gm12350-201ENSMUST00000121208 462 ntBASIC17.02■□□□□ 0.32
Shroom1Q5SX79 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
Shroom1Q5SX79 Gm27525-201ENSMUST00000184465 107 ntBASIC17.02■□□□□ 0.32
Shroom1Q5SX79 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.02■□□□□ 0.32
Shroom1Q5SX79 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shroom1Q5SX79 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shroom1Q5SX79 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shroom1Q5SX79 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Shroom1Q5SX79 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.32
Shroom1Q5SX79 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shroom1Q5SX79 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Shroom1Q5SX79 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.02■□□□□ 0.31
Shroom1Q5SX79 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.02■□□□□ 0.31
Shroom1Q5SX79 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Shroom1Q5SX79 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Shroom1Q5SX79 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.02■□□□□ 0.31
Shroom1Q5SX79 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Shroom1Q5SX79 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shroom1Q5SX79 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.01■□□□□ 0.31
Shroom1Q5SX79 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Shroom1Q5SX79 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shroom1Q5SX79 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shroom1Q5SX79 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shroom1Q5SX79 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Shroom1Q5SX79 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shroom1Q5SX79 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shroom1Q5SX79 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Shroom1Q5SX79 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Shroom1Q5SX79 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shroom1Q5SX79 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Shroom1Q5SX79 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shroom1Q5SX79 Gm4535-201ENSMUST00000182274 558 ntBASIC17.01■□□□□ 0.31
Shroom1Q5SX79 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.01■□□□□ 0.31
Shroom1Q5SX79 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Shroom1Q5SX79 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shroom1Q5SX79 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Shroom1Q5SX79 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Shroom1Q5SX79 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms