Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-2Q5R1I4 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-2Q5R1I4 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-2Q5R1I4 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-2Q5R1I4 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-2Q5R1I4 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-2Q5R1I4 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-2Q5R1I4 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-2Q5R1I4 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-2Q5R1I4 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
Trav6-2Q5R1I4 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Trav6-2Q5R1I4 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-2Q5R1I4 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.07□□□□□ -0.16
Trav6-2Q5R1I4 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-2Q5R1I4 Gm9727-201ENSMUST00000161387 555 ntBASIC14.07□□□□□ -0.16
Trav6-2Q5R1I4 Gm6736-201ENSMUST00000166583 948 ntBASIC14.07□□□□□ -0.16
Trav6-2Q5R1I4 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav6-2Q5R1I4 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Trav6-2Q5R1I4 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-2Q5R1I4 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-2Q5R1I4 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trav6-2Q5R1I4 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trav6-2Q5R1I4 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-2Q5R1I4 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-2Q5R1I4 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Trav6-2Q5R1I4 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-2Q5R1I4 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-2Q5R1I4 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-2Q5R1I4 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-2Q5R1I4 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-2Q5R1I4 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-2Q5R1I4 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-2Q5R1I4 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-2Q5R1I4 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-2Q5R1I4 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-2Q5R1I4 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.06□□□□□ -0.16
Trav6-2Q5R1I4 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-2Q5R1I4 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-2Q5R1I4 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-2Q5R1I4 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-2Q5R1I4 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-2Q5R1I4 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-2Q5R1I4 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-2Q5R1I4 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-2Q5R1I4 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trav6-2Q5R1I4 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Trav6-2Q5R1I4 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-2Q5R1I4 Gm25925-201ENSMUST00000158314 306 ntBASIC14.06□□□□□ -0.16
Trav6-2Q5R1I4 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trav6-2Q5R1I4 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-2Q5R1I4 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.06□□□□□ -0.16
Trav6-2Q5R1I4 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trav6-2Q5R1I4 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-2Q5R1I4 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-2Q5R1I4 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-2Q5R1I4 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.06□□□□□ -0.16
Trav6-2Q5R1I4 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-2Q5R1I4 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-2Q5R1I4 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-2Q5R1I4 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-2Q5R1I4 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-2Q5R1I4 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav6-2Q5R1I4 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trav6-2Q5R1I4 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-2Q5R1I4 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Trav6-2Q5R1I4 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-2Q5R1I4 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trav6-2Q5R1I4 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trav6-2Q5R1I4 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.05□□□□□ -0.16
Trav6-2Q5R1I4 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-2Q5R1I4 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-2Q5R1I4 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-2Q5R1I4 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-2Q5R1I4 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-2Q5R1I4 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-2Q5R1I4 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-2Q5R1I4 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trav6-2Q5R1I4 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-2Q5R1I4 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.05□□□□□ -0.16
Trav6-2Q5R1I4 Gm2756-201ENSMUST00000195851 400 ntBASIC14.05□□□□□ -0.16
Trav6-2Q5R1I4 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trav6-2Q5R1I4 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.05□□□□□ -0.16
Trav6-2Q5R1I4 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.05□□□□□ -0.16
Trav6-2Q5R1I4 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-2Q5R1I4 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-2Q5R1I4 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.05□□□□□ -0.16
Trav6-2Q5R1I4 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-2Q5R1I4 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-2Q5R1I4 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-2Q5R1I4 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-2Q5R1I4 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-2Q5R1I4 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-2Q5R1I4 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-2Q5R1I4 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-2Q5R1I4 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trav6-2Q5R1I4 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trav6-2Q5R1I4 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trav6-2Q5R1I4 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-2Q5R1I4 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-2Q5R1I4 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms