Protein–RNA interactions for Protein: Q5R1A4

Trdv2-2, T cell receptor delta variable 2-2 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-2Q5R1A4 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trdv2-2Q5R1A4 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trdv2-2Q5R1A4 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC12.33□□□□□ -0.44
Trdv2-2Q5R1A4 Il3ra-202ENSMUST00000223589 738 ntBASIC12.33□□□□□ -0.44
Trdv2-2Q5R1A4 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trdv2-2Q5R1A4 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trdv2-2Q5R1A4 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Trdv2-2Q5R1A4 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trdv2-2Q5R1A4 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trdv2-2Q5R1A4 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC12.33□□□□□ -0.44
Trdv2-2Q5R1A4 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trdv2-2Q5R1A4 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trdv2-2Q5R1A4 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trdv2-2Q5R1A4 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trdv2-2Q5R1A4 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trdv2-2Q5R1A4 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trdv2-2Q5R1A4 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trdv2-2Q5R1A4 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trdv2-2Q5R1A4 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trdv2-2Q5R1A4 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trdv2-2Q5R1A4 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trdv2-2Q5R1A4 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trdv2-2Q5R1A4 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trdv2-2Q5R1A4 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trdv2-2Q5R1A4 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trdv2-2Q5R1A4 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trdv2-2Q5R1A4 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trdv2-2Q5R1A4 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trdv2-2Q5R1A4 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC12.32□□□□□ -0.44
Trdv2-2Q5R1A4 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC12.32□□□□□ -0.44
Trdv2-2Q5R1A4 Gm37856-201ENSMUST00000191634 999 ntBASIC12.32□□□□□ -0.44
Trdv2-2Q5R1A4 Gm44878-201ENSMUST00000205812 1295 ntBASIC12.32□□□□□ -0.44
Trdv2-2Q5R1A4 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trdv2-2Q5R1A4 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trdv2-2Q5R1A4 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trdv2-2Q5R1A4 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trdv2-2Q5R1A4 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Trdv2-2Q5R1A4 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trdv2-2Q5R1A4 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trdv2-2Q5R1A4 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trdv2-2Q5R1A4 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trdv2-2Q5R1A4 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trdv2-2Q5R1A4 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trdv2-2Q5R1A4 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trdv2-2Q5R1A4 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv2-2Q5R1A4 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv2-2Q5R1A4 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv2-2Q5R1A4 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Trdv2-2Q5R1A4 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trdv2-2Q5R1A4 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv2-2Q5R1A4 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv2-2Q5R1A4 Prob1-201ENSMUST00000097619 3021 ntBASIC12.31□□□□□ -0.44
Trdv2-2Q5R1A4 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.31□□□□□ -0.44
Trdv2-2Q5R1A4 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC12.31□□□□□ -0.44
Trdv2-2Q5R1A4 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trdv2-2Q5R1A4 Gm38027-201ENSMUST00000192315 235 ntBASIC12.31□□□□□ -0.44
Trdv2-2Q5R1A4 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trdv2-2Q5R1A4 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv2-2Q5R1A4 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trdv2-2Q5R1A4 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trdv2-2Q5R1A4 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trdv2-2Q5R1A4 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv2-2Q5R1A4 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv2-2Q5R1A4 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv2-2Q5R1A4 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv2-2Q5R1A4 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv2-2Q5R1A4 Gm7712-202ENSMUST00000222331 1510 ntBASIC12.31□□□□□ -0.44
Trdv2-2Q5R1A4 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv2-2Q5R1A4 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv2-2Q5R1A4 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trdv2-2Q5R1A4 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.31□□□□□ -0.44
Trdv2-2Q5R1A4 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv2-2Q5R1A4 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv2-2Q5R1A4 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv2-2Q5R1A4 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv2-2Q5R1A4 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv2-2Q5R1A4 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.3□□□□□ -0.44
Trdv2-2Q5R1A4 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Trdv2-2Q5R1A4 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv2-2Q5R1A4 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv2-2Q5R1A4 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv2-2Q5R1A4 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv2-2Q5R1A4 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC12.3□□□□□ -0.44
Trdv2-2Q5R1A4 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv2-2Q5R1A4 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv2-2Q5R1A4 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trdv2-2Q5R1A4 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv2-2Q5R1A4 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC12.3□□□□□ -0.44
Trdv2-2Q5R1A4 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv2-2Q5R1A4 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv2-2Q5R1A4 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trdv2-2Q5R1A4 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv2-2Q5R1A4 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv2-2Q5R1A4 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv2-2Q5R1A4 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Trdv2-2Q5R1A4 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv2-2Q5R1A4 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv2-2Q5R1A4 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv2-2Q5R1A4 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv2-2Q5R1A4 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms