Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf20Q5DTM8 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Rnf20Q5DTM8 CT009713.7-201ENSMUST00000224689 571 ntBASIC19.13■□□□□ 0.65
Rnf20Q5DTM8 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf20Q5DTM8 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Rnf20Q5DTM8 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf20Q5DTM8 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf20Q5DTM8 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf20Q5DTM8 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC19.13■□□□□ 0.65
Rnf20Q5DTM8 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf20Q5DTM8 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC19.13■□□□□ 0.65
Rnf20Q5DTM8 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf20Q5DTM8 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Rnf20Q5DTM8 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf20Q5DTM8 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf20Q5DTM8 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf20Q5DTM8 Gm19430-201ENSMUST00000193847 2137 ntBASIC19.12■□□□□ 0.65
Rnf20Q5DTM8 Rbfox2-206ENSMUST00000227314 1810 ntBASIC19.12■□□□□ 0.65
Rnf20Q5DTM8 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf20Q5DTM8 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf20Q5DTM8 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf20Q5DTM8 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Rnf20Q5DTM8 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf20Q5DTM8 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf20Q5DTM8 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.12■□□□□ 0.65
Rnf20Q5DTM8 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Rnf20Q5DTM8 AC114585.2-202ENSMUST00000228094 426 ntBASIC19.12■□□□□ 0.65
Rnf20Q5DTM8 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf20Q5DTM8 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC19.12■□□□□ 0.65
Rnf20Q5DTM8 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf20Q5DTM8 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Rnf20Q5DTM8 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Rnf20Q5DTM8 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf20Q5DTM8 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf20Q5DTM8 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf20Q5DTM8 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf20Q5DTM8 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC19.11■□□□□ 0.65
Rnf20Q5DTM8 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf20Q5DTM8 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf20Q5DTM8 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf20Q5DTM8 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf20Q5DTM8 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf20Q5DTM8 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf20Q5DTM8 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf20Q5DTM8 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf20Q5DTM8 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf20Q5DTM8 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf20Q5DTM8 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf20Q5DTM8 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC19.11■□□□□ 0.65
Rnf20Q5DTM8 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC19.11■□□□□ 0.65
Rnf20Q5DTM8 Ighv6-1-201ENSMUST00000193612 343 ntBASIC19.11■□□□□ 0.65
Rnf20Q5DTM8 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf20Q5DTM8 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf20Q5DTM8 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf20Q5DTM8 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf20Q5DTM8 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf20Q5DTM8 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf20Q5DTM8 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf20Q5DTM8 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
Rnf20Q5DTM8 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf20Q5DTM8 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC19.11■□□□□ 0.65
Rnf20Q5DTM8 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC19.11■□□□□ 0.65
Rnf20Q5DTM8 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf20Q5DTM8 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Rnf20Q5DTM8 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf20Q5DTM8 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Rnf20Q5DTM8 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf20Q5DTM8 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf20Q5DTM8 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Rnf20Q5DTM8 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
Rnf20Q5DTM8 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf20Q5DTM8 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.1■□□□□ 0.65
Rnf20Q5DTM8 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Rnf20Q5DTM8 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
Rnf20Q5DTM8 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf20Q5DTM8 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf20Q5DTM8 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf20Q5DTM8 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf20Q5DTM8 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf20Q5DTM8 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC19.1■□□□□ 0.65
Rnf20Q5DTM8 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf20Q5DTM8 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf20Q5DTM8 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Rnf20Q5DTM8 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf20Q5DTM8 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf20Q5DTM8 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf20Q5DTM8 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Rnf20Q5DTM8 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf20Q5DTM8 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf20Q5DTM8 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Rnf20Q5DTM8 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
Rnf20Q5DTM8 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf20Q5DTM8 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf20Q5DTM8 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf20Q5DTM8 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Rnf20Q5DTM8 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf20Q5DTM8 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf20Q5DTM8 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf20Q5DTM8 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf20Q5DTM8 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms