Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scn2bQ56A07 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.9■□□□□ 0.14
Scn2bQ56A07 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Scn2bQ56A07 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scn2bQ56A07 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scn2bQ56A07 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scn2bQ56A07 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scn2bQ56A07 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scn2bQ56A07 Mir1668-201ENSMUST00000184114 107 ntBASIC15.9■□□□□ 0.14
Scn2bQ56A07 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Scn2bQ56A07 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.9■□□□□ 0.14
Scn2bQ56A07 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scn2bQ56A07 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scn2bQ56A07 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Scn2bQ56A07 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scn2bQ56A07 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scn2bQ56A07 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scn2bQ56A07 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Scn2bQ56A07 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Scn2bQ56A07 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Scn2bQ56A07 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Scn2bQ56A07 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.9■□□□□ 0.14
Scn2bQ56A07 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scn2bQ56A07 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scn2bQ56A07 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Scn2bQ56A07 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Scn2bQ56A07 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn2bQ56A07 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn2bQ56A07 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.89■□□□□ 0.13
Scn2bQ56A07 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn2bQ56A07 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn2bQ56A07 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn2bQ56A07 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Scn2bQ56A07 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.89■□□□□ 0.13
Scn2bQ56A07 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.89■□□□□ 0.13
Scn2bQ56A07 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Scn2bQ56A07 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Scn2bQ56A07 Gm18032-201ENSMUST00000222541 538 ntBASIC15.89■□□□□ 0.13
Scn2bQ56A07 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Scn2bQ56A07 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn2bQ56A07 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.89■□□□□ 0.13
Scn2bQ56A07 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn2bQ56A07 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn2bQ56A07 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn2bQ56A07 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn2bQ56A07 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn2bQ56A07 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn2bQ56A07 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn2bQ56A07 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn2bQ56A07 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.89■□□□□ 0.13
Scn2bQ56A07 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn2bQ56A07 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn2bQ56A07 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.88■□□□□ 0.13
Scn2bQ56A07 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scn2bQ56A07 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Scn2bQ56A07 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Scn2bQ56A07 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Scn2bQ56A07 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.88■□□□□ 0.13
Scn2bQ56A07 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scn2bQ56A07 Gm11336-201ENSMUST00000118168 334 ntBASIC15.88■□□□□ 0.13
Scn2bQ56A07 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.88■□□□□ 0.13
Scn2bQ56A07 Gm7977-201ENSMUST00000193787 748 ntBASIC15.88■□□□□ 0.13
Scn2bQ56A07 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scn2bQ56A07 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.88■□□□□ 0.13
Scn2bQ56A07 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scn2bQ56A07 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scn2bQ56A07 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scn2bQ56A07 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scn2bQ56A07 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scn2bQ56A07 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scn2bQ56A07 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Scn2bQ56A07 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Scn2bQ56A07 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.88■□□□□ 0.13
Scn2bQ56A07 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Scn2bQ56A07 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Scn2bQ56A07 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scn2bQ56A07 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn2bQ56A07 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn2bQ56A07 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Scn2bQ56A07 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Scn2bQ56A07 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Scn2bQ56A07 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn2bQ56A07 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn2bQ56A07 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Scn2bQ56A07 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn2bQ56A07 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn2bQ56A07 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.87■□□□□ 0.13
Scn2bQ56A07 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn2bQ56A07 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.87■□□□□ 0.13
Scn2bQ56A07 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn2bQ56A07 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn2bQ56A07 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn2bQ56A07 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn2bQ56A07 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn2bQ56A07 Gm29707-201ENSMUST00000196325 491 ntBASIC15.87■□□□□ 0.13
Scn2bQ56A07 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.87■□□□□ 0.13
Scn2bQ56A07 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Scn2bQ56A07 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn2bQ56A07 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn2bQ56A07 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms