Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rc3h1Q4VGL6 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC18.5■□□□□ 0.55
Rc3h1Q4VGL6 Gm10284-201ENSMUST00000145057 1005 ntBASIC18.5■□□□□ 0.55
Rc3h1Q4VGL6 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Rc3h1Q4VGL6 Mir5126-201ENSMUST00000175513 77 ntBASIC18.5■□□□□ 0.55
Rc3h1Q4VGL6 Gm10481-201ENSMUST00000179228 1002 ntBASIC18.5■□□□□ 0.55
Rc3h1Q4VGL6 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC18.5■□□□□ 0.55
Rc3h1Q4VGL6 Gm2574-201ENSMUST00000181051 1002 ntBASIC18.5■□□□□ 0.55
Rc3h1Q4VGL6 Gm3200-201ENSMUST00000181493 1002 ntBASIC18.5■□□□□ 0.55
Rc3h1Q4VGL6 Gm8825-201ENSMUST00000182565 998 ntBASIC18.5■□□□□ 0.55
Rc3h1Q4VGL6 Gm4518-201ENSMUST00000182638 718 ntBASIC18.5■□□□□ 0.55
Rc3h1Q4VGL6 Gm8330-201ENSMUST00000182754 1008 ntBASIC18.5■□□□□ 0.55
Rc3h1Q4VGL6 Gm4575-201ENSMUST00000182991 1002 ntBASIC18.5■□□□□ 0.55
Rc3h1Q4VGL6 Gm8709-201ENSMUST00000183230 1012 ntBASIC18.5■□□□□ 0.55
Rc3h1Q4VGL6 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC18.5■□□□□ 0.55
Rc3h1Q4VGL6 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rc3h1Q4VGL6 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rc3h1Q4VGL6 Gm10293-201ENSMUST00000076317 1002 ntBASIC18.5■□□□□ 0.55
Rc3h1Q4VGL6 Gm6316-201ENSMUST00000082064 1020 ntBASIC18.5■□□□□ 0.55
Rc3h1Q4VGL6 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rc3h1Q4VGL6 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rc3h1Q4VGL6 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rc3h1Q4VGL6 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rc3h1Q4VGL6 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rc3h1Q4VGL6 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rc3h1Q4VGL6 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rc3h1Q4VGL6 Gm1401-201ENSMUST00000122048 772 ntBASIC18.49■□□□□ 0.55
Rc3h1Q4VGL6 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rc3h1Q4VGL6 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rc3h1Q4VGL6 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rc3h1Q4VGL6 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC18.49■□□□□ 0.55
Rc3h1Q4VGL6 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC18.49■□□□□ 0.55
Rc3h1Q4VGL6 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rc3h1Q4VGL6 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rc3h1Q4VGL6 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC18.49■□□□□ 0.55
Rc3h1Q4VGL6 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.49■□□□□ 0.55
Rc3h1Q4VGL6 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rc3h1Q4VGL6 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Rc3h1Q4VGL6 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rc3h1Q4VGL6 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rc3h1Q4VGL6 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
Rc3h1Q4VGL6 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Rc3h1Q4VGL6 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rc3h1Q4VGL6 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rc3h1Q4VGL6 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Rc3h1Q4VGL6 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rc3h1Q4VGL6 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC18.48■□□□□ 0.55
Rc3h1Q4VGL6 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
Rc3h1Q4VGL6 Gm18206-201ENSMUST00000207027 926 ntBASIC18.48■□□□□ 0.55
Rc3h1Q4VGL6 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rc3h1Q4VGL6 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rc3h1Q4VGL6 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Rc3h1Q4VGL6 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Rc3h1Q4VGL6 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rc3h1Q4VGL6 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rc3h1Q4VGL6 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rc3h1Q4VGL6 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rc3h1Q4VGL6 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rc3h1Q4VGL6 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rc3h1Q4VGL6 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Rc3h1Q4VGL6 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rc3h1Q4VGL6 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rc3h1Q4VGL6 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rc3h1Q4VGL6 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rc3h1Q4VGL6 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rc3h1Q4VGL6 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rc3h1Q4VGL6 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC18.47■□□□□ 0.55
Rc3h1Q4VGL6 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
Rc3h1Q4VGL6 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rc3h1Q4VGL6 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.47■□□□□ 0.55
Rc3h1Q4VGL6 AC117588.1-201ENSMUST00000228510 999 ntBASIC18.47■□□□□ 0.55
Rc3h1Q4VGL6 Gm15590-201ENSMUST00000078419 552 ntBASIC18.47■□□□□ 0.55
Rc3h1Q4VGL6 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rc3h1Q4VGL6 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rc3h1Q4VGL6 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rc3h1Q4VGL6 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rc3h1Q4VGL6 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Rc3h1Q4VGL6 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rc3h1Q4VGL6 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rc3h1Q4VGL6 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rc3h1Q4VGL6 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rc3h1Q4VGL6 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Rc3h1Q4VGL6 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rc3h1Q4VGL6 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rc3h1Q4VGL6 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rc3h1Q4VGL6 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rc3h1Q4VGL6 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rc3h1Q4VGL6 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rc3h1Q4VGL6 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rc3h1Q4VGL6 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rc3h1Q4VGL6 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC18.46■□□□□ 0.55
Rc3h1Q4VGL6 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rc3h1Q4VGL6 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC18.46■□□□□ 0.55
Rc3h1Q4VGL6 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC18.46■□□□□ 0.55
Rc3h1Q4VGL6 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rc3h1Q4VGL6 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
Rc3h1Q4VGL6 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rc3h1Q4VGL6 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rc3h1Q4VGL6 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rc3h1Q4VGL6 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms