Protein–RNA interactions for Protein: Q45KJ6

Lin28b, Protein lin-28 homolog B, mousemouse

Known RBP Predictions only

Length 247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28bQ45KJ6 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.23■□□□□ 0.03
Lin28bQ45KJ6 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC15.23■□□□□ 0.03
Lin28bQ45KJ6 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Lin28bQ45KJ6 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Lin28bQ45KJ6 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lin28bQ45KJ6 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.23■□□□□ 0.03
Lin28bQ45KJ6 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lin28bQ45KJ6 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lin28bQ45KJ6 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lin28bQ45KJ6 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Lin28bQ45KJ6 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lin28bQ45KJ6 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lin28bQ45KJ6 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.23■□□□□ 0.03
Lin28bQ45KJ6 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Lin28bQ45KJ6 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lin28bQ45KJ6 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lin28bQ45KJ6 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.22■□□□□ 0.03
Lin28bQ45KJ6 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lin28bQ45KJ6 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.22■□□□□ 0.03
Lin28bQ45KJ6 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lin28bQ45KJ6 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lin28bQ45KJ6 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lin28bQ45KJ6 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lin28bQ45KJ6 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lin28bQ45KJ6 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.22■□□□□ 0.03
Lin28bQ45KJ6 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.22■□□□□ 0.03
Lin28bQ45KJ6 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lin28bQ45KJ6 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lin28bQ45KJ6 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.22■□□□□ 0.03
Lin28bQ45KJ6 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.22■□□□□ 0.03
Lin28bQ45KJ6 Gm15590-201ENSMUST00000078419 552 ntBASIC15.22■□□□□ 0.03
Lin28bQ45KJ6 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Lin28bQ45KJ6 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Lin28bQ45KJ6 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lin28bQ45KJ6 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lin28bQ45KJ6 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lin28bQ45KJ6 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.22■□□□□ 0.03
Lin28bQ45KJ6 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lin28bQ45KJ6 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lin28bQ45KJ6 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lin28bQ45KJ6 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lin28bQ45KJ6 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Lin28bQ45KJ6 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Lin28bQ45KJ6 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Lin28bQ45KJ6 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lin28bQ45KJ6 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
Lin28bQ45KJ6 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lin28bQ45KJ6 Gm11780-201ENSMUST00000136880 516 ntBASIC15.21■□□□□ 0.03
Lin28bQ45KJ6 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.21■□□□□ 0.03
Lin28bQ45KJ6 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Lin28bQ45KJ6 Gm7230-201ENSMUST00000173026 815 ntBASIC15.21■□□□□ 0.03
Lin28bQ45KJ6 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.21■□□□□ 0.03
Lin28bQ45KJ6 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.21■□□□□ 0.03
Lin28bQ45KJ6 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lin28bQ45KJ6 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lin28bQ45KJ6 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lin28bQ45KJ6 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lin28bQ45KJ6 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Lin28bQ45KJ6 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lin28bQ45KJ6 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lin28bQ45KJ6 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lin28bQ45KJ6 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Lin28bQ45KJ6 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Lin28bQ45KJ6 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Lin28bQ45KJ6 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Lin28bQ45KJ6 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Lin28bQ45KJ6 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Lin28bQ45KJ6 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Lin28bQ45KJ6 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Lin28bQ45KJ6 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Lin28bQ45KJ6 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Lin28bQ45KJ6 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Lin28bQ45KJ6 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.2■□□□□ 0.02
Lin28bQ45KJ6 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Lin28bQ45KJ6 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lin28bQ45KJ6 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lin28bQ45KJ6 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Lin28bQ45KJ6 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lin28bQ45KJ6 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lin28bQ45KJ6 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.2■□□□□ 0.02
Lin28bQ45KJ6 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Lin28bQ45KJ6 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.2■□□□□ 0.02
Lin28bQ45KJ6 Gm12497-201ENSMUST00000138778 237 ntBASIC15.2■□□□□ 0.02
Lin28bQ45KJ6 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Lin28bQ45KJ6 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.2■□□□□ 0.02
Lin28bQ45KJ6 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lin28bQ45KJ6 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Lin28bQ45KJ6 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Lin28bQ45KJ6 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lin28bQ45KJ6 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lin28bQ45KJ6 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lin28bQ45KJ6 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lin28bQ45KJ6 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Lin28bQ45KJ6 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lin28bQ45KJ6 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Lin28bQ45KJ6 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lin28bQ45KJ6 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.19■□□□□ 0.02
Lin28bQ45KJ6 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lin28bQ45KJ6 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lin28bQ45KJ6 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms