Protein–RNA interactions for Protein: Q3UQS2

Lsmem1, Leucine-rich single-pass membrane protein 1, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsmem1Q3UQS2 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lsmem1Q3UQS2 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lsmem1Q3UQS2 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lsmem1Q3UQS2 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lsmem1Q3UQS2 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lsmem1Q3UQS2 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Lsmem1Q3UQS2 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Lsmem1Q3UQS2 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lsmem1Q3UQS2 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
Lsmem1Q3UQS2 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lsmem1Q3UQS2 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Lsmem1Q3UQS2 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lsmem1Q3UQS2 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lsmem1Q3UQS2 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Lsmem1Q3UQS2 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Lsmem1Q3UQS2 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lsmem1Q3UQS2 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Lsmem1Q3UQS2 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lsmem1Q3UQS2 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lsmem1Q3UQS2 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lsmem1Q3UQS2 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lsmem1Q3UQS2 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.26■□□□□ 0.19
Lsmem1Q3UQS2 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lsmem1Q3UQS2 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lsmem1Q3UQS2 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lsmem1Q3UQS2 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lsmem1Q3UQS2 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Lsmem1Q3UQS2 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lsmem1Q3UQS2 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.26■□□□□ 0.19
Lsmem1Q3UQS2 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Lsmem1Q3UQS2 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lsmem1Q3UQS2 Gm25745-201ENSMUST00000174945 133 ntBASIC16.26■□□□□ 0.19
Lsmem1Q3UQS2 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.26■□□□□ 0.19
Lsmem1Q3UQS2 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lsmem1Q3UQS2 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Lsmem1Q3UQS2 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lsmem1Q3UQS2 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lsmem1Q3UQS2 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lsmem1Q3UQS2 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Lsmem1Q3UQS2 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lsmem1Q3UQS2 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lsmem1Q3UQS2 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.26■□□□□ 0.19
Lsmem1Q3UQS2 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lsmem1Q3UQS2 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lsmem1Q3UQS2 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Lsmem1Q3UQS2 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lsmem1Q3UQS2 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Lsmem1Q3UQS2 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Lsmem1Q3UQS2 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lsmem1Q3UQS2 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.25■□□□□ 0.19
Lsmem1Q3UQS2 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.25■□□□□ 0.19
Lsmem1Q3UQS2 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lsmem1Q3UQS2 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.25■□□□□ 0.19
Lsmem1Q3UQS2 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.25■□□□□ 0.19
Lsmem1Q3UQS2 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lsmem1Q3UQS2 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.25■□□□□ 0.19
Lsmem1Q3UQS2 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
Lsmem1Q3UQS2 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lsmem1Q3UQS2 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lsmem1Q3UQS2 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Lsmem1Q3UQS2 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lsmem1Q3UQS2 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lsmem1Q3UQS2 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lsmem1Q3UQS2 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Lsmem1Q3UQS2 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lsmem1Q3UQS2 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Lsmem1Q3UQS2 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lsmem1Q3UQS2 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lsmem1Q3UQS2 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Lsmem1Q3UQS2 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Lsmem1Q3UQS2 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lsmem1Q3UQS2 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.24■□□□□ 0.19
Lsmem1Q3UQS2 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Lsmem1Q3UQS2 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.24■□□□□ 0.19
Lsmem1Q3UQS2 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Lsmem1Q3UQS2 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Lsmem1Q3UQS2 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.24■□□□□ 0.19
Lsmem1Q3UQS2 Gm9172-201ENSMUST00000212092 954 ntBASIC16.24■□□□□ 0.19
Lsmem1Q3UQS2 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
Lsmem1Q3UQS2 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lsmem1Q3UQS2 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lsmem1Q3UQS2 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lsmem1Q3UQS2 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lsmem1Q3UQS2 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lsmem1Q3UQS2 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lsmem1Q3UQS2 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lsmem1Q3UQS2 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lsmem1Q3UQS2 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lsmem1Q3UQS2 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lsmem1Q3UQS2 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lsmem1Q3UQS2 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Lsmem1Q3UQS2 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lsmem1Q3UQS2 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lsmem1Q3UQS2 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lsmem1Q3UQS2 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lsmem1Q3UQS2 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Lsmem1Q3UQS2 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Lsmem1Q3UQS2 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.23■□□□□ 0.19
Lsmem1Q3UQS2 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Lsmem1Q3UQS2 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms