Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cks1brtQ3UNC9 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cks1brtQ3UNC9 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
Cks1brtQ3UNC9 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Cks1brtQ3UNC9 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Cks1brtQ3UNC9 Gm13401-201ENSMUST00000117074 291 ntBASIC11.63□□□□□ -0.55
Cks1brtQ3UNC9 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Cks1brtQ3UNC9 Gm15546-201ENSMUST00000122095 826 ntBASIC11.63□□□□□ -0.55
Cks1brtQ3UNC9 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cks1brtQ3UNC9 Gm8493-201ENSMUST00000196881 489 ntBASIC11.63□□□□□ -0.55
Cks1brtQ3UNC9 Wdr70-203ENSMUST00000227371 1130 ntBASIC11.63□□□□□ -0.55
Cks1brtQ3UNC9 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cks1brtQ3UNC9 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Cks1brtQ3UNC9 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Cks1brtQ3UNC9 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cks1brtQ3UNC9 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cks1brtQ3UNC9 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
Cks1brtQ3UNC9 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cks1brtQ3UNC9 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cks1brtQ3UNC9 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cks1brtQ3UNC9 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cks1brtQ3UNC9 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cks1brtQ3UNC9 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cks1brtQ3UNC9 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cks1brtQ3UNC9 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cks1brtQ3UNC9 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cks1brtQ3UNC9 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cks1brtQ3UNC9 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cks1brtQ3UNC9 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cks1brtQ3UNC9 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cks1brtQ3UNC9 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cks1brtQ3UNC9 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cks1brtQ3UNC9 Gm37736-201ENSMUST00000193564 2802 ntBASIC11.62□□□□□ -0.55
Cks1brtQ3UNC9 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Cks1brtQ3UNC9 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cks1brtQ3UNC9 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC11.62□□□□□ -0.55
Cks1brtQ3UNC9 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cks1brtQ3UNC9 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cks1brtQ3UNC9 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC11.62□□□□□ -0.55
Cks1brtQ3UNC9 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cks1brtQ3UNC9 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cks1brtQ3UNC9 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cks1brtQ3UNC9 Gm9988-201ENSMUST00000069786 435 ntBASIC11.62□□□□□ -0.55
Cks1brtQ3UNC9 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cks1brtQ3UNC9 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cks1brtQ3UNC9 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cks1brtQ3UNC9 Ap5m1-205ENSMUST00000227431 3757 ntBASIC11.62□□□□□ -0.55
Cks1brtQ3UNC9 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cks1brtQ3UNC9 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cks1brtQ3UNC9 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cks1brtQ3UNC9 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cks1brtQ3UNC9 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC11.62□□□□□ -0.55
Cks1brtQ3UNC9 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cks1brtQ3UNC9 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Cks1brtQ3UNC9 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Cks1brtQ3UNC9 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Cks1brtQ3UNC9 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cks1brtQ3UNC9 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cks1brtQ3UNC9 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cks1brtQ3UNC9 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cks1brtQ3UNC9 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cks1brtQ3UNC9 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cks1brtQ3UNC9 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC11.61□□□□□ -0.55
Cks1brtQ3UNC9 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cks1brtQ3UNC9 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cks1brtQ3UNC9 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Cks1brtQ3UNC9 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cks1brtQ3UNC9 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cks1brtQ3UNC9 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Cks1brtQ3UNC9 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC11.61□□□□□ -0.55
Cks1brtQ3UNC9 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cks1brtQ3UNC9 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cks1brtQ3UNC9 Gm13146-201ENSMUST00000118508 780 ntBASIC11.61□□□□□ -0.55
Cks1brtQ3UNC9 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cks1brtQ3UNC9 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC11.61□□□□□ -0.55
Cks1brtQ3UNC9 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cks1brtQ3UNC9 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Cks1brtQ3UNC9 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cks1brtQ3UNC9 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cks1brtQ3UNC9 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cks1brtQ3UNC9 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cks1brtQ3UNC9 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cks1brtQ3UNC9 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cks1brtQ3UNC9 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cks1brtQ3UNC9 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cks1brtQ3UNC9 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cks1brtQ3UNC9 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cks1brtQ3UNC9 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Cks1brtQ3UNC9 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cks1brtQ3UNC9 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cks1brtQ3UNC9 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cks1brtQ3UNC9 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cks1brtQ3UNC9 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cks1brtQ3UNC9 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cks1brtQ3UNC9 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Cks1brtQ3UNC9 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cks1brtQ3UNC9 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cks1brtQ3UNC9 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cks1brtQ3UNC9 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cks1brtQ3UNC9 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms