Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Naf1Q3UMQ8 Gm4459-201ENSMUST00000118750 468 ntBASIC16.28■□□□□ 0.2
Naf1Q3UMQ8 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.28■□□□□ 0.2
Naf1Q3UMQ8 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Naf1Q3UMQ8 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Naf1Q3UMQ8 Mir6404-201ENSMUST00000183699 94 ntBASIC16.28■□□□□ 0.2
Naf1Q3UMQ8 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.28■□□□□ 0.2
Naf1Q3UMQ8 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Naf1Q3UMQ8 Gm18195-201ENSMUST00000207604 706 ntBASIC16.28■□□□□ 0.2
Naf1Q3UMQ8 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Naf1Q3UMQ8 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Naf1Q3UMQ8 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Naf1Q3UMQ8 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Naf1Q3UMQ8 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Naf1Q3UMQ8 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Naf1Q3UMQ8 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Naf1Q3UMQ8 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Naf1Q3UMQ8 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.28■□□□□ 0.2
Naf1Q3UMQ8 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Naf1Q3UMQ8 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Naf1Q3UMQ8 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Naf1Q3UMQ8 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Naf1Q3UMQ8 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
Naf1Q3UMQ8 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Naf1Q3UMQ8 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Naf1Q3UMQ8 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Naf1Q3UMQ8 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Naf1Q3UMQ8 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.27■□□□□ 0.2
Naf1Q3UMQ8 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Naf1Q3UMQ8 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Naf1Q3UMQ8 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Naf1Q3UMQ8 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Naf1Q3UMQ8 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Naf1Q3UMQ8 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Naf1Q3UMQ8 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Naf1Q3UMQ8 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Naf1Q3UMQ8 Gm13418-201ENSMUST00000119097 944 ntBASIC16.27■□□□□ 0.2
Naf1Q3UMQ8 Gm18733-201ENSMUST00000173950 856 ntBASIC16.27■□□□□ 0.2
Naf1Q3UMQ8 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.27■□□□□ 0.2
Naf1Q3UMQ8 Gm2651-201ENSMUST00000203560 838 ntBASIC16.27■□□□□ 0.2
Naf1Q3UMQ8 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Naf1Q3UMQ8 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Naf1Q3UMQ8 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Naf1Q3UMQ8 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Naf1Q3UMQ8 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Naf1Q3UMQ8 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.27■□□□□ 0.19
Naf1Q3UMQ8 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Naf1Q3UMQ8 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Naf1Q3UMQ8 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Naf1Q3UMQ8 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Naf1Q3UMQ8 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Naf1Q3UMQ8 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Naf1Q3UMQ8 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Naf1Q3UMQ8 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Naf1Q3UMQ8 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Naf1Q3UMQ8 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Naf1Q3UMQ8 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Naf1Q3UMQ8 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Naf1Q3UMQ8 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.26■□□□□ 0.19
Naf1Q3UMQ8 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Naf1Q3UMQ8 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Naf1Q3UMQ8 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Naf1Q3UMQ8 Gm12497-201ENSMUST00000138778 237 ntBASIC16.26■□□□□ 0.19
Naf1Q3UMQ8 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.26■□□□□ 0.19
Naf1Q3UMQ8 Mir5131-201ENSMUST00000175426 93 ntBASIC16.26■□□□□ 0.19
Naf1Q3UMQ8 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.26■□□□□ 0.19
Naf1Q3UMQ8 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Naf1Q3UMQ8 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.26■□□□□ 0.19
Naf1Q3UMQ8 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Naf1Q3UMQ8 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Naf1Q3UMQ8 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.26■□□□□ 0.19
Naf1Q3UMQ8 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Naf1Q3UMQ8 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Naf1Q3UMQ8 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Naf1Q3UMQ8 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Naf1Q3UMQ8 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.26■□□□□ 0.19
Naf1Q3UMQ8 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Naf1Q3UMQ8 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Naf1Q3UMQ8 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Naf1Q3UMQ8 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Naf1Q3UMQ8 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Naf1Q3UMQ8 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Naf1Q3UMQ8 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.25■□□□□ 0.19
Naf1Q3UMQ8 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Naf1Q3UMQ8 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Naf1Q3UMQ8 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Naf1Q3UMQ8 Gm25990-201ENSMUST00000102440 86 ntBASIC16.25■□□□□ 0.19
Naf1Q3UMQ8 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Naf1Q3UMQ8 Gm8097-201ENSMUST00000117903 829 ntBASIC16.25■□□□□ 0.19
Naf1Q3UMQ8 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.25■□□□□ 0.19
Naf1Q3UMQ8 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.25■□□□□ 0.19
Naf1Q3UMQ8 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Naf1Q3UMQ8 Gm4535-201ENSMUST00000182274 558 ntBASIC16.25■□□□□ 0.19
Naf1Q3UMQ8 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.25■□□□□ 0.19
Naf1Q3UMQ8 Gm10060-201ENSMUST00000212002 111 ntBASIC16.25■□□□□ 0.19
Naf1Q3UMQ8 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Naf1Q3UMQ8 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Naf1Q3UMQ8 Gm10355-201ENSMUST00000097146 517 ntBASIC16.25■□□□□ 0.19
Naf1Q3UMQ8 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Naf1Q3UMQ8 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms