Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tff1Q08423 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tff1Q08423 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tff1Q08423 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tff1Q08423 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Tff1Q08423 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tff1Q08423 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tff1Q08423 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tff1Q08423 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tff1Q08423 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tff1Q08423 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Tff1Q08423 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tff1Q08423 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tff1Q08423 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tff1Q08423 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Tff1Q08423 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tff1Q08423 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tff1Q08423 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tff1Q08423 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Tff1Q08423 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tff1Q08423 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tff1Q08423 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tff1Q08423 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tff1Q08423 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC13.36□□□□□ -0.27
Tff1Q08423 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tff1Q08423 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC13.36□□□□□ -0.27
Tff1Q08423 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tff1Q08423 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tff1Q08423 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tff1Q08423 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tff1Q08423 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tff1Q08423 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Tff1Q08423 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tff1Q08423 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tff1Q08423 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tff1Q08423 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tff1Q08423 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Tff1Q08423 Phf7-203ENSMUST00000226565 1971 ntBASIC13.36□□□□□ -0.27
Tff1Q08423 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tff1Q08423 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tff1Q08423 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.35□□□□□ -0.27
Tff1Q08423 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tff1Q08423 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Tff1Q08423 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tff1Q08423 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Tff1Q08423 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Tff1Q08423 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tff1Q08423 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tff1Q08423 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.35□□□□□ -0.27
Tff1Q08423 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Tff1Q08423 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC13.35□□□□□ -0.27
Tff1Q08423 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Tff1Q08423 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tff1Q08423 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Tff1Q08423 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Tff1Q08423 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tff1Q08423 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tff1Q08423 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tff1Q08423 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tff1Q08423 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tff1Q08423 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tff1Q08423 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tff1Q08423 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Tff1Q08423 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tff1Q08423 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tff1Q08423 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tff1Q08423 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tff1Q08423 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tff1Q08423 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tff1Q08423 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Tff1Q08423 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tff1Q08423 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tff1Q08423 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.34□□□□□ -0.27
Tff1Q08423 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tff1Q08423 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Tff1Q08423 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tff1Q08423 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Tff1Q08423 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Tff1Q08423 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tff1Q08423 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tff1Q08423 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tff1Q08423 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.34□□□□□ -0.27
Tff1Q08423 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tff1Q08423 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Tff1Q08423 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tff1Q08423 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tff1Q08423 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC13.34□□□□□ -0.27
Tff1Q08423 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Tff1Q08423 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC13.34□□□□□ -0.27
Tff1Q08423 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tff1Q08423 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tff1Q08423 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tff1Q08423 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.34□□□□□ -0.27
Tff1Q08423 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.34□□□□□ -0.27
Tff1Q08423 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tff1Q08423 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.34□□□□□ -0.27
Tff1Q08423 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Tff1Q08423 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Tff1Q08423 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tff1Q08423 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms