Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hspg2Q05793 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC11.76□□□□□ -0.53
Hspg2Q05793 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hspg2Q05793 Gm26596-201ENSMUST00000180464 2655 ntBASIC11.75□□□□□ -0.53
Hspg2Q05793 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hspg2Q05793 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC11.75□□□□□ -0.53
Hspg2Q05793 Gm5177-201ENSMUST00000183092 997 ntBASIC11.75□□□□□ -0.53
Hspg2Q05793 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hspg2Q05793 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hspg2Q05793 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hspg2Q05793 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hspg2Q05793 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hspg2Q05793 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hspg2Q05793 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hspg2Q05793 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hspg2Q05793 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hspg2Q05793 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC11.75□□□□□ -0.53
Hspg2Q05793 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hspg2Q05793 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC11.75□□□□□ -0.53
Hspg2Q05793 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hspg2Q05793 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hspg2Q05793 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hspg2Q05793 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC11.75□□□□□ -0.53
Hspg2Q05793 CT025626.1-201ENSMUST00000223735 1455 ntBASIC11.75□□□□□ -0.53
Hspg2Q05793 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC11.75□□□□□ -0.53
Hspg2Q05793 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hspg2Q05793 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hspg2Q05793 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hspg2Q05793 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Hspg2Q05793 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC11.74□□□□□ -0.53
Hspg2Q05793 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hspg2Q05793 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hspg2Q05793 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC11.74□□□□□ -0.53
Hspg2Q05793 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hspg2Q05793 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.74□□□□□ -0.53
Hspg2Q05793 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hspg2Q05793 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hspg2Q05793 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Hspg2Q05793 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Hspg2Q05793 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Hspg2Q05793 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hspg2Q05793 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hspg2Q05793 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Hspg2Q05793 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hspg2Q05793 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hspg2Q05793 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hspg2Q05793 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hspg2Q05793 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC11.74□□□□□ -0.53
Hspg2Q05793 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hspg2Q05793 Gm25948-201ENSMUST00000175334 112 ntBASIC11.74□□□□□ -0.53
Hspg2Q05793 Gm7653-201ENSMUST00000214567 508 ntBASIC11.74□□□□□ -0.53
Hspg2Q05793 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hspg2Q05793 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hspg2Q05793 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hspg2Q05793 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC11.74□□□□□ -0.53
Hspg2Q05793 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hspg2Q05793 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hspg2Q05793 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Hspg2Q05793 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hspg2Q05793 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC11.74□□□□□ -0.53
Hspg2Q05793 Gm37153-201ENSMUST00000193637 231 ntBASIC11.74□□□□□ -0.53
Hspg2Q05793 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC11.74□□□□□ -0.53
Hspg2Q05793 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hspg2Q05793 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hspg2Q05793 Fgf17-202ENSMUST00000227123 1336 ntBASIC11.74□□□□□ -0.53
Hspg2Q05793 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hspg2Q05793 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC11.73□□□□□ -0.53
Hspg2Q05793 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Hspg2Q05793 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hspg2Q05793 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hspg2Q05793 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hspg2Q05793 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hspg2Q05793 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Hspg2Q05793 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Hspg2Q05793 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hspg2Q05793 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Hspg2Q05793 Rprl2-201ENSMUST00000157150 290 ntBASIC11.73□□□□□ -0.53
Hspg2Q05793 Gm45612-201ENSMUST00000211320 160 ntBASIC11.73□□□□□ -0.53
Hspg2Q05793 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hspg2Q05793 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hspg2Q05793 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Hspg2Q05793 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hspg2Q05793 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hspg2Q05793 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hspg2Q05793 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC11.73□□□□□ -0.53
Hspg2Q05793 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hspg2Q05793 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hspg2Q05793 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC11.73□□□□□ -0.53
Hspg2Q05793 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hspg2Q05793 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hspg2Q05793 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hspg2Q05793 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Hspg2Q05793 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC11.72□□□□□ -0.53
Hspg2Q05793 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC11.72□□□□□ -0.53
Hspg2Q05793 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hspg2Q05793 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hspg2Q05793 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Hspg2Q05793 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hspg2Q05793 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Hspg2Q05793 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms