Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC18.19■□□□□ 0.5
GabpaQ00422 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC18.19■□□□□ 0.5
GabpaQ00422 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC18.19■□□□□ 0.5
GabpaQ00422 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
GabpaQ00422 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
GabpaQ00422 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
GabpaQ00422 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GabpaQ00422 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GabpaQ00422 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GabpaQ00422 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GabpaQ00422 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GabpaQ00422 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC18.19■□□□□ 0.5
GabpaQ00422 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GabpaQ00422 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
GabpaQ00422 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC18.19■□□□□ 0.5
GabpaQ00422 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
GabpaQ00422 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
GabpaQ00422 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
GabpaQ00422 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GabpaQ00422 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GabpaQ00422 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GabpaQ00422 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GabpaQ00422 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
GabpaQ00422 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC18.18■□□□□ 0.5
GabpaQ00422 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC18.18■□□□□ 0.5
GabpaQ00422 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GabpaQ00422 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
GabpaQ00422 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.18■□□□□ 0.5
GabpaQ00422 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC18.18■□□□□ 0.5
GabpaQ00422 AC084391.1-201ENSMUST00000200651 141 ntBASIC18.18■□□□□ 0.5
GabpaQ00422 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
GabpaQ00422 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GabpaQ00422 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
GabpaQ00422 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
GabpaQ00422 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
GabpaQ00422 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC18.18■□□□□ 0.5
GabpaQ00422 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
GabpaQ00422 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
GabpaQ00422 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GabpaQ00422 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
GabpaQ00422 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
GabpaQ00422 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
GabpaQ00422 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
GabpaQ00422 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.17■□□□□ 0.5
GabpaQ00422 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.17■□□□□ 0.5
GabpaQ00422 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
GabpaQ00422 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
GabpaQ00422 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC18.17■□□□□ 0.5
GabpaQ00422 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
GabpaQ00422 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
GabpaQ00422 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
GabpaQ00422 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
GabpaQ00422 Gm43073-201ENSMUST00000198200 1189 ntBASIC18.17■□□□□ 0.5
GabpaQ00422 Gm42670-201ENSMUST00000201816 1292 ntBASIC18.17■□□□□ 0.5
GabpaQ00422 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
GabpaQ00422 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GabpaQ00422 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC18.17■□□□□ 0.5
GabpaQ00422 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
GabpaQ00422 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC18.17■□□□□ 0.5
GabpaQ00422 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GabpaQ00422 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
GabpaQ00422 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
GabpaQ00422 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
GabpaQ00422 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GabpaQ00422 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GabpaQ00422 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GabpaQ00422 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GabpaQ00422 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC18.16■□□□□ 0.5
GabpaQ00422 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC18.16■□□□□ 0.5
GabpaQ00422 Gm43935-201ENSMUST00000203569 1050 ntBASIC18.16■□□□□ 0.5
GabpaQ00422 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GabpaQ00422 AC117588.1-201ENSMUST00000228510 999 ntBASIC18.16■□□□□ 0.5
GabpaQ00422 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GabpaQ00422 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GabpaQ00422 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
GabpaQ00422 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GabpaQ00422 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
GabpaQ00422 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GabpaQ00422 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
GabpaQ00422 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
GabpaQ00422 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.15■□□□□ 0.5
GabpaQ00422 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
GabpaQ00422 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GabpaQ00422 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC18.15■□□□□ 0.5
GabpaQ00422 Gm14140-201ENSMUST00000119999 995 ntBASIC18.15■□□□□ 0.5
GabpaQ00422 Gm6184-201ENSMUST00000120403 1261 ntBASIC18.15■□□□□ 0.5
GabpaQ00422 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
GabpaQ00422 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC18.15■□□□□ 0.5
GabpaQ00422 Gm5264-201ENSMUST00000190584 848 ntBASIC18.15■□□□□ 0.5
GabpaQ00422 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC18.15■□□□□ 0.5
GabpaQ00422 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC18.15■□□□□ 0.5
GabpaQ00422 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.15■□□□□ 0.5
GabpaQ00422 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
GabpaQ00422 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GabpaQ00422 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GabpaQ00422 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
GabpaQ00422 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
GabpaQ00422 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
GabpaQ00422 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GabpaQ00422 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms