Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx3-2P97503 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx3-2P97503 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx3-2P97503 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx3-2P97503 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx3-2P97503 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Nkx3-2P97503 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx3-2P97503 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.15■□□□□ 0.02
Nkx3-2P97503 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx3-2P97503 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx3-2P97503 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Nkx3-2P97503 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Nkx3-2P97503 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Nkx3-2P97503 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx3-2P97503 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx3-2P97503 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.14■□□□□ 0.01
Nkx3-2P97503 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.14■□□□□ 0.01
Nkx3-2P97503 Mir8098-201ENSMUST00000184011 137 ntBASIC15.14■□□□□ 0.01
Nkx3-2P97503 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx3-2P97503 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx3-2P97503 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.14■□□□□ 0.01
Nkx3-2P97503 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx3-2P97503 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.14■□□□□ 0.01
Nkx3-2P97503 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx3-2P97503 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx3-2P97503 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx3-2P97503 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx3-2P97503 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Nkx3-2P97503 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Nkx3-2P97503 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx3-2P97503 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.13■□□□□ 0.01
Nkx3-2P97503 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.13■□□□□ 0.01
Nkx3-2P97503 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx3-2P97503 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Nkx3-2P97503 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Nkx3-2P97503 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.13■□□□□ 0.01
Nkx3-2P97503 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.13■□□□□ 0.01
Nkx3-2P97503 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx3-2P97503 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Nkx3-2P97503 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx3-2P97503 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx3-2P97503 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx3-2P97503 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx3-2P97503 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx3-2P97503 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Nkx3-2P97503 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx3-2P97503 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx3-2P97503 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Nkx3-2P97503 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx3-2P97503 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.12■□□□□ 0.01
Nkx3-2P97503 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Nkx3-2P97503 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx3-2P97503 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx3-2P97503 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx3-2P97503 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx3-2P97503 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Nkx3-2P97503 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx3-2P97503 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx3-2P97503 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Nkx3-2P97503 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx3-2P97503 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx3-2P97503 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.12■□□□□ 0.01
Nkx3-2P97503 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.12■□□□□ 0.01
Nkx3-2P97503 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.12■□□□□ 0.01
Nkx3-2P97503 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Nkx3-2P97503 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.12■□□□□ 0.01
Nkx3-2P97503 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx3-2P97503 Gm7461-201ENSMUST00000058918 827 ntBASIC15.12■□□□□ 0.01
Nkx3-2P97503 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx3-2P97503 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx3-2P97503 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Nkx3-2P97503 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Nkx3-2P97503 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx3-2P97503 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx3-2P97503 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Nkx3-2P97503 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx3-2P97503 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx3-2P97503 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx3-2P97503 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx3-2P97503 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx3-2P97503 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx3-2P97503 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.11■□□□□ 0.01
Nkx3-2P97503 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx3-2P97503 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.11■□□□□ 0.01
Nkx3-2P97503 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Nkx3-2P97503 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx3-2P97503 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Nkx3-2P97503 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx3-2P97503 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx3-2P97503 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx3-2P97503 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx3-2P97503 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.11■□□□□ 0.01
Nkx3-2P97503 Gm15165-201ENSMUST00000118140 502 ntBASIC15.11■□□□□ 0.01
Nkx3-2P97503 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx3-2P97503 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.11■□□□□ 0.01
Nkx3-2P97503 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Nkx3-2P97503 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.11■□□□□ 0.01
Nkx3-2P97503 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx3-2P97503 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx3-2P97503 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms