Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lig3P97386 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Lig3P97386 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lig3P97386 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.48■□□□□ 0.39
Lig3P97386 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Lig3P97386 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lig3P97386 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lig3P97386 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lig3P97386 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Lig3P97386 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.47■□□□□ 0.39
Lig3P97386 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lig3P97386 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.47■□□□□ 0.39
Lig3P97386 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Lig3P97386 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lig3P97386 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lig3P97386 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lig3P97386 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lig3P97386 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lig3P97386 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.47■□□□□ 0.39
Lig3P97386 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Lig3P97386 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lig3P97386 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lig3P97386 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lig3P97386 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lig3P97386 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Lig3P97386 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Lig3P97386 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lig3P97386 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Lig3P97386 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lig3P97386 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Lig3P97386 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.46■□□□□ 0.39
Lig3P97386 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lig3P97386 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Lig3P97386 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.46■□□□□ 0.39
Lig3P97386 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.46■□□□□ 0.39
Lig3P97386 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Lig3P97386 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Lig3P97386 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.46■□□□□ 0.39
Lig3P97386 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lig3P97386 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lig3P97386 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Lig3P97386 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Lig3P97386 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Lig3P97386 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Lig3P97386 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lig3P97386 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Lig3P97386 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lig3P97386 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lig3P97386 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lig3P97386 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lig3P97386 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lig3P97386 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lig3P97386 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.45■□□□□ 0.38
Lig3P97386 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.45■□□□□ 0.38
Lig3P97386 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Lig3P97386 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Lig3P97386 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Lig3P97386 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.45■□□□□ 0.38
Lig3P97386 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lig3P97386 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Lig3P97386 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Lig3P97386 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Lig3P97386 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lig3P97386 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Lig3P97386 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Lig3P97386 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lig3P97386 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Lig3P97386 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Lig3P97386 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lig3P97386 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lig3P97386 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lig3P97386 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lig3P97386 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lig3P97386 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Lig3P97386 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lig3P97386 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.44■□□□□ 0.38
Lig3P97386 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.44■□□□□ 0.38
Lig3P97386 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lig3P97386 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lig3P97386 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lig3P97386 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lig3P97386 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lig3P97386 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lig3P97386 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lig3P97386 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lig3P97386 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.43■□□□□ 0.38
Lig3P97386 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Lig3P97386 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lig3P97386 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lig3P97386 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lig3P97386 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lig3P97386 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lig3P97386 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lig3P97386 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lig3P97386 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lig3P97386 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lig3P97386 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.43■□□□□ 0.38
Lig3P97386 Gm12644-201ENSMUST00000119935 606 ntBASIC17.43■□□□□ 0.38
Lig3P97386 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lig3P97386 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms