Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim43cP86449 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
Trim43cP86449 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim43cP86449 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim43cP86449 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.46■□□□□ 0.39
Trim43cP86449 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim43cP86449 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.46■□□□□ 0.39
Trim43cP86449 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim43cP86449 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.46■□□□□ 0.39
Trim43cP86449 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim43cP86449 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim43cP86449 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim43cP86449 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim43cP86449 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trim43cP86449 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trim43cP86449 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.45■□□□□ 0.38
Trim43cP86449 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim43cP86449 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim43cP86449 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim43cP86449 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim43cP86449 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim43cP86449 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim43cP86449 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
Trim43cP86449 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim43cP86449 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.45■□□□□ 0.38
Trim43cP86449 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim43cP86449 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.45■□□□□ 0.38
Trim43cP86449 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim43cP86449 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim43cP86449 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim43cP86449 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim43cP86449 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim43cP86449 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim43cP86449 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.45■□□□□ 0.38
Trim43cP86449 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim43cP86449 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim43cP86449 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim43cP86449 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim43cP86449 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim43cP86449 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim43cP86449 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.44■□□□□ 0.38
Trim43cP86449 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim43cP86449 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Trim43cP86449 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim43cP86449 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.44■□□□□ 0.38
Trim43cP86449 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim43cP86449 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Trim43cP86449 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim43cP86449 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim43cP86449 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim43cP86449 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim43cP86449 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim43cP86449 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim43cP86449 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Trim43cP86449 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim43cP86449 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim43cP86449 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim43cP86449 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim43cP86449 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim43cP86449 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim43cP86449 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim43cP86449 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim43cP86449 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim43cP86449 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim43cP86449 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim43cP86449 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim43cP86449 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim43cP86449 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.43■□□□□ 0.38
Trim43cP86449 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim43cP86449 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim43cP86449 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim43cP86449 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.43■□□□□ 0.38
Trim43cP86449 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim43cP86449 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim43cP86449 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Trim43cP86449 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim43cP86449 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim43cP86449 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim43cP86449 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Trim43cP86449 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.43■□□□□ 0.38
Trim43cP86449 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim43cP86449 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim43cP86449 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim43cP86449 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim43cP86449 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim43cP86449 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim43cP86449 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.42■□□□□ 0.38
Trim43cP86449 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim43cP86449 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim43cP86449 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim43cP86449 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Trim43cP86449 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.42■□□□□ 0.38
Trim43cP86449 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim43cP86449 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim43cP86449 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim43cP86449 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.42■□□□□ 0.38
Trim43cP86449 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim43cP86449 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim43cP86449 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim43cP86449 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms