Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SgcaP82350 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SgcaP82350 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SgcaP82350 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SgcaP82350 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SgcaP82350 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SgcaP82350 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SgcaP82350 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.49□□□□□ -0.25
SgcaP82350 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SgcaP82350 Gm21596-201ENSMUST00000178049 1316 ntBASIC13.49□□□□□ -0.25
SgcaP82350 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SgcaP82350 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SgcaP82350 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SgcaP82350 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SgcaP82350 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
SgcaP82350 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
SgcaP82350 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SgcaP82350 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SgcaP82350 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
SgcaP82350 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SgcaP82350 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SgcaP82350 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SgcaP82350 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SgcaP82350 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SgcaP82350 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SgcaP82350 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SgcaP82350 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SgcaP82350 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SgcaP82350 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
SgcaP82350 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SgcaP82350 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.48□□□□□ -0.25
SgcaP82350 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.48□□□□□ -0.25
SgcaP82350 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SgcaP82350 Gm13158-201ENSMUST00000122007 736 ntBASIC13.48□□□□□ -0.25
SgcaP82350 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SgcaP82350 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
SgcaP82350 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SgcaP82350 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SgcaP82350 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
SgcaP82350 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SgcaP82350 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SgcaP82350 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SgcaP82350 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
SgcaP82350 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
SgcaP82350 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
SgcaP82350 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SgcaP82350 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SgcaP82350 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SgcaP82350 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SgcaP82350 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SgcaP82350 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SgcaP82350 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
SgcaP82350 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SgcaP82350 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SgcaP82350 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SgcaP82350 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SgcaP82350 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
SgcaP82350 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SgcaP82350 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SgcaP82350 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
SgcaP82350 Gm11249-201ENSMUST00000117071 859 ntBASIC13.47□□□□□ -0.25
SgcaP82350 Gm12896-201ENSMUST00000118430 226 ntBASIC13.47□□□□□ -0.25
SgcaP82350 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SgcaP82350 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SgcaP82350 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SgcaP82350 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
SgcaP82350 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SgcaP82350 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.47□□□□□ -0.25
SgcaP82350 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SgcaP82350 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SgcaP82350 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SgcaP82350 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SgcaP82350 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SgcaP82350 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SgcaP82350 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
SgcaP82350 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SgcaP82350 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SgcaP82350 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SgcaP82350 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
SgcaP82350 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SgcaP82350 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SgcaP82350 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SgcaP82350 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SgcaP82350 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SgcaP82350 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SgcaP82350 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SgcaP82350 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SgcaP82350 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SgcaP82350 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SgcaP82350 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
SgcaP82350 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SgcaP82350 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SgcaP82350 Gm15039-201ENSMUST00000118914 875 ntBASIC13.46□□□□□ -0.25
SgcaP82350 Gm12933-201ENSMUST00000120203 872 ntBASIC13.46□□□□□ -0.25
SgcaP82350 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SgcaP82350 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC13.46□□□□□ -0.25
SgcaP82350 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SgcaP82350 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SgcaP82350 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SgcaP82350 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms