Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ufd1P70362 AV356131-201ENSMUST00000206201 750 ntBASIC13.82□□□□□ -0.2
Ufd1P70362 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ufd1P70362 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ufd1P70362 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ufd1P70362 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ufd1P70362 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ufd1P70362 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Ufd1P70362 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ufd1P70362 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ufd1P70362 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ufd1P70362 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ufd1P70362 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ufd1P70362 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.82□□□□□ -0.2
Ufd1P70362 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ufd1P70362 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ufd1P70362 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ufd1P70362 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ufd1P70362 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ufd1P70362 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ufd1P70362 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ufd1P70362 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.81□□□□□ -0.2
Ufd1P70362 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Ufd1P70362 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ufd1P70362 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC13.81□□□□□ -0.2
Ufd1P70362 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ufd1P70362 Gm17661-201ENSMUST00000170317 270 ntBASIC13.81□□□□□ -0.2
Ufd1P70362 Gm4968-201ENSMUST00000071458 858 ntBASIC13.81□□□□□ -0.2
Ufd1P70362 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Ufd1P70362 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ufd1P70362 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ufd1P70362 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ufd1P70362 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ufd1P70362 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ufd1P70362 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ufd1P70362 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.81□□□□□ -0.2
Ufd1P70362 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ufd1P70362 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ufd1P70362 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ufd1P70362 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.81□□□□□ -0.2
Ufd1P70362 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ufd1P70362 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.8□□□□□ -0.2
Ufd1P70362 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Ufd1P70362 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ufd1P70362 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ufd1P70362 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ufd1P70362 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ufd1P70362 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.8□□□□□ -0.2
Ufd1P70362 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ufd1P70362 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ufd1P70362 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Ufd1P70362 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ufd1P70362 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ufd1P70362 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ufd1P70362 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ufd1P70362 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ufd1P70362 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ufd1P70362 Gm24841-201ENSMUST00000158676 357 ntBASIC13.8□□□□□ -0.2
Ufd1P70362 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ufd1P70362 Gm42642-201ENSMUST00000200683 355 ntBASIC13.8□□□□□ -0.2
Ufd1P70362 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Ufd1P70362 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ufd1P70362 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ufd1P70362 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ufd1P70362 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ufd1P70362 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ufd1P70362 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ufd1P70362 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ufd1P70362 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Ufd1P70362 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ufd1P70362 App-207ENSMUST00000227737 2827 ntBASIC13.8□□□□□ -0.2
Ufd1P70362 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Ufd1P70362 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ufd1P70362 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ufd1P70362 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ufd1P70362 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ufd1P70362 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ufd1P70362 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Ufd1P70362 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ufd1P70362 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ufd1P70362 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.79□□□□□ -0.2
Ufd1P70362 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ufd1P70362 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ufd1P70362 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ufd1P70362 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ufd1P70362 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ufd1P70362 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ufd1P70362 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC13.79□□□□□ -0.2
Ufd1P70362 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC13.79□□□□□ -0.2
Ufd1P70362 Gm27000-201ENSMUST00000182943 842 ntBASIC13.79□□□□□ -0.2
Ufd1P70362 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ufd1P70362 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ufd1P70362 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Ufd1P70362 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ufd1P70362 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.79□□□□□ -0.2
Ufd1P70362 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ufd1P70362 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Ufd1P70362 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.79□□□□□ -0.2
Ufd1P70362 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ufd1P70362 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms