Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim4P70271 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim4P70271 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim4P70271 Ighv6-1-201ENSMUST00000193612 343 ntBASIC13.36□□□□□ -0.27
Pdlim4P70271 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim4P70271 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Pdlim4P70271 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim4P70271 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim4P70271 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim4P70271 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim4P70271 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim4P70271 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Pdlim4P70271 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim4P70271 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim4P70271 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.36□□□□□ -0.27
Pdlim4P70271 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Pdlim4P70271 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Pdlim4P70271 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Pdlim4P70271 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.35□□□□□ -0.27
Pdlim4P70271 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.35□□□□□ -0.27
Pdlim4P70271 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim4P70271 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.35□□□□□ -0.27
Pdlim4P70271 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim4P70271 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.35□□□□□ -0.27
Pdlim4P70271 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Pdlim4P70271 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Pdlim4P70271 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.35□□□□□ -0.27
Pdlim4P70271 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim4P70271 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim4P70271 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim4P70271 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim4P70271 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim4P70271 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim4P70271 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC13.35□□□□□ -0.27
Pdlim4P70271 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Pdlim4P70271 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim4P70271 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC13.35□□□□□ -0.27
Pdlim4P70271 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC13.35□□□□□ -0.27
Pdlim4P70271 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim4P70271 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim4P70271 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim4P70271 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC13.35□□□□□ -0.27
Pdlim4P70271 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim4P70271 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim4P70271 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Pdlim4P70271 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim4P70271 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Pdlim4P70271 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim4P70271 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Pdlim4P70271 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim4P70271 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim4P70271 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC13.35□□□□□ -0.27
Pdlim4P70271 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim4P70271 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim4P70271 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim4P70271 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim4P70271 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim4P70271 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim4P70271 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Pdlim4P70271 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Pdlim4P70271 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Pdlim4P70271 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Pdlim4P70271 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Pdlim4P70271 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim4P70271 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.34□□□□□ -0.27
Pdlim4P70271 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Pdlim4P70271 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.34□□□□□ -0.27
Pdlim4P70271 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim4P70271 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim4P70271 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim4P70271 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim4P70271 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.34□□□□□ -0.27
Pdlim4P70271 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.34□□□□□ -0.27
Pdlim4P70271 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim4P70271 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim4P70271 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim4P70271 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim4P70271 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim4P70271 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim4P70271 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Pdlim4P70271 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim4P70271 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Pdlim4P70271 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Pdlim4P70271 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim4P70271 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim4P70271 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim4P70271 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim4P70271 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim4P70271 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim4P70271 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Pdlim4P70271 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim4P70271 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim4P70271 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim4P70271 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.33□□□□□ -0.27
Pdlim4P70271 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pdlim4P70271 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pdlim4P70271 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pdlim4P70271 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pdlim4P70271 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pdlim4P70271 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms