Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.03■□□□□ -0
Six5P70178 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Six5P70178 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Six5P70178 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Six5P70178 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Six5P70178 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Six5P70178 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.03■□□□□ -0
Six5P70178 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Six5P70178 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.03■□□□□ -0
Six5P70178 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.03■□□□□ -0
Six5P70178 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.03■□□□□ -0
Six5P70178 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC15.03■□□□□ -0
Six5P70178 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.03■□□□□ -0
Six5P70178 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Six5P70178 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Six5P70178 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Six5P70178 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Six5P70178 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Six5P70178 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.03■□□□□ -0
Six5P70178 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.03■□□□□ -0
Six5P70178 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.03■□□□□ -0
Six5P70178 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Six5P70178 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Six5P70178 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Six5P70178 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Six5P70178 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Six5P70178 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.02■□□□□ -0
Six5P70178 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Six5P70178 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Six5P70178 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Six5P70178 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Six5P70178 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.02■□□□□ -0
Six5P70178 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Six5P70178 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.02■□□□□ -0
Six5P70178 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Six5P70178 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Six5P70178 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.02■□□□□ -0
Six5P70178 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.02■□□□□ -0
Six5P70178 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Six5P70178 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.02■□□□□ -0
Six5P70178 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.02□□□□□ -0.01
Six5P70178 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Six5P70178 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Six5P70178 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Six5P70178 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Six5P70178 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Six5P70178 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Six5P70178 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Six5P70178 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Six5P70178 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Six5P70178 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Six5P70178 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Six5P70178 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Six5P70178 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Six5P70178 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Six5P70178 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Six5P70178 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Six5P70178 Gm7284-201ENSMUST00000131667 944 ntBASIC15.01□□□□□ -0.01
Six5P70178 Rprl3-201ENSMUST00000157400 290 ntBASIC15.01□□□□□ -0.01
Six5P70178 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Six5P70178 Mir6404-201ENSMUST00000183699 94 ntBASIC15.01□□□□□ -0.01
Six5P70178 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Six5P70178 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Six5P70178 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.01□□□□□ -0.01
Six5P70178 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Six5P70178 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Six5P70178 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Six5P70178 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Six5P70178 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Six5P70178 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Six5P70178 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Six5P70178 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Six5P70178 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Six5P70178 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Six5P70178 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Six5P70178 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Six5P70178 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15□□□□□ -0.01
Six5P70178 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Six5P70178 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Six5P70178 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Six5P70178 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Six5P70178 Olfr129-201ENSMUST00000122318 993 ntBASIC15□□□□□ -0.01
Six5P70178 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15□□□□□ -0.01
Six5P70178 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Six5P70178 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Six5P70178 Gm27357-201ENSMUST00000183754 135 ntBASIC15□□□□□ -0.01
Six5P70178 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Six5P70178 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Six5P70178 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Six5P70178 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Six5P70178 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15□□□□□ -0.01
Six5P70178 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Six5P70178 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Six5P70178 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15□□□□□ -0.01
Six5P70178 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15□□□□□ -0.01
Six5P70178 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Six5P70178 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Six5P70178 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Six5P70178 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Six5P70178 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms