Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.09□□□□□ -0.15
Lsm6P62313 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Lsm6P62313 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm6P62313 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.09□□□□□ -0.15
Lsm6P62313 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm6P62313 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm6P62313 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm6P62313 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Lsm6P62313 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm6P62313 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm6P62313 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm6P62313 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lsm6P62313 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lsm6P62313 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Lsm6P62313 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lsm6P62313 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lsm6P62313 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.08□□□□□ -0.15
Lsm6P62313 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lsm6P62313 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lsm6P62313 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lsm6P62313 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lsm6P62313 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm6P62313 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm6P62313 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm6P62313 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Lsm6P62313 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm6P62313 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm6P62313 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.08□□□□□ -0.16
Lsm6P62313 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm6P62313 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm6P62313 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm6P62313 AA414768-201ENSMUST00000121924 1257 ntBASIC14.08□□□□□ -0.16
Lsm6P62313 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm6P62313 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm6P62313 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.08□□□□□ -0.16
Lsm6P62313 Gm6345-202ENSMUST00000180900 204 ntBASIC14.08□□□□□ -0.16
Lsm6P62313 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm6P62313 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm6P62313 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm6P62313 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm6P62313 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm6P62313 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm6P62313 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm6P62313 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm6P62313 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm6P62313 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.16
Lsm6P62313 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm6P62313 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm6P62313 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm6P62313 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm6P62313 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm6P62313 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm6P62313 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm6P62313 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm6P62313 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm6P62313 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm6P62313 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm6P62313 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.07□□□□□ -0.16
Lsm6P62313 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm6P62313 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm6P62313 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm6P62313 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm6P62313 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm6P62313 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm6P62313 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm6P62313 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm6P62313 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm6P62313 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm6P62313 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.07□□□□□ -0.16
Lsm6P62313 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.07□□□□□ -0.16
Lsm6P62313 Gm29518-201ENSMUST00000190858 372 ntBASIC14.07□□□□□ -0.16
Lsm6P62313 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.07□□□□□ -0.16
Lsm6P62313 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm6P62313 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm6P62313 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm6P62313 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm6P62313 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm6P62313 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm6P62313 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.07□□□□□ -0.16
Lsm6P62313 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm6P62313 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Lsm6P62313 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.07□□□□□ -0.16
Lsm6P62313 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm6P62313 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.06□□□□□ -0.16
Lsm6P62313 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Lsm6P62313 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm6P62313 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm6P62313 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm6P62313 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm6P62313 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm6P62313 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm6P62313 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm6P62313 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm6P62313 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm6P62313 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm6P62313 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm6P62313 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm6P62313 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm6P62313 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Lsm6P62313 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms